Collimonas arenae: LT85_2903
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Entry
LT85_2903 CDS
T03512
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
care
Collimonas arenae
Pathway
care00020
Citrate cycle (TCA cycle)
care00270
Cysteine and methionine metabolism
care00620
Pyruvate metabolism
care00630
Glyoxylate and dicarboxylate metabolism
care00680
Methane metabolism
care00710
Carbon fixation by Calvin cycle
care00720
Other carbon fixation pathways
care01100
Metabolic pathways
care01110
Biosynthesis of secondary metabolites
care01120
Microbial metabolism in diverse environments
care01200
Carbon metabolism
Module
care_M00009
Citrate cycle (TCA cycle, Krebs cycle)
care_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
care_M00012
Glyoxylate cycle
care_M00168
CAM (Crassulacean acid metabolism), dark
care_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT85_2903
00620 Pyruvate metabolism
LT85_2903
00630 Glyoxylate and dicarboxylate metabolism
LT85_2903
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LT85_2903
00720 Other carbon fixation pathways
LT85_2903
00680 Methane metabolism
LT85_2903
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LT85_2903
Enzymes [BR:
care01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LT85_2903
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AIY42061
UniProt:
A0A0A1FBY0
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Position
3247356..3248345
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AA seq
329 aa
AA seq
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MAKSPLRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEV
DDCAFPLLAGITAHSDPLTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD
AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA
IEKLCVWGNHSPTMYADYRYATADGASVKDLINDQVWNKDVFLPTVGKRGAAIIEARGLS
SAASAANAAIDHVRDWVLGTNGKWTTMGVPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL
EIDAFSQERINLTLKELQEERDGVKHLVG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcccctctgcgtgttgccgttaccggcgccgctggtcaaatcggttattcc
ctgttgttccgcatcgccaatggcgacctgctcggcaaagaccaaccggtcattctgcaa
ctgctggaaatccctgacgaaaaagcacaaaaagcgctgaaaggcgtgatcatggaagtc
gacgattgcgccttcccgctgctggctggcatcactgcccacagcgatccgctgactgca
ttcaaggatgctgacgttgccttgctggttggcgcccgcccacgcggcccaggcatggag
cgcaaagacctgctggaagccaatgcacagattttcacagtgcaaggcaaggcgctggat
gctgttgcttcgcgcaatgtcaaggtactggtggttggcaatccagccaacaccaacgct
tacatcgccatgaaatcggcgcctaacctgccagccaagaactttacagcgatgctgcgc
ctggaccacaaccgcgccttgtcgcaagttgcggccaagatcggcaaaccggtttccgct
attgaaaaactgtgcgtatggggcaaccactcgccaaccatgtacgcagactatcgctac
gcgacagccgacggcgcatcggtcaaagacctgatcaacgaccaagtctggaacaaggac
gtgttcctgccaacagttggcaagcgcggcgcagcgatcatcgaagcacgcggcctgtcg
tcggcagcctctgctgctaacgcagcaatcgaccacgtacgcgactgggtactgggtacc
aacggcaagtggaccaccatgggcgtgccgtccgatggctcttacggcatccctgaaggc
accatgttcggcttccctgtcacaaccgagaacggcgaatacaaaatcgttcaaggcttg
gaaatcgacgcgttctcgcaagagcgcatcaacctcacgctgaaagagctgcaagaagag
cgtgatggcgtgaaacacttggtcggctaa
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