Collimonas arenae: LT85_3201
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Entry
LT85_3201 CDS
T03512
Name
(GenBank) RND multidrug efflux transporter; Acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
care
Collimonas arenae
Pathway
care01501
beta-Lactam resistance
care01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
care00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT85_3201
01503 Cationic antimicrobial peptide (CAMP) resistance
LT85_3201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_3201
01504 Antimicrobial resistance genes [BR:
care01504
]
LT85_3201
Transporters [BR:
care02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LT85_3201
Antimicrobial resistance genes [BR:
care01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT85_3201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF7123
Motif
Other DBs
NCBI-ProteinID:
AIY42359
UniProt:
A0A0A1FFC9
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All DBs
Position
3586290..3589406
Genome browser
AA seq
1038 aa
AA seq
DB search
MWITKISINHPVFATMVMVALLVLGLFSYQELGLEQMPDIQTPGLLIEMRYPGASPEAVE
NDITKPIEDTINSVSGIKSILSSSYEGRNSTWVTFELNVNMDRAVQEVRDKIAQIRPGMP
KDAKDPFIVRGDTLNTQPLASLSVTSKTRSLRDLSTLTEQIIVKRLQAVAGVAKIDVGGN
VSRQVLVNLKPEQMAAQKVGVDEVLNAIQTTNQDMPAGLITRGVSDQLVRLEGKMKDPRA
FGQIIVARRGGAPVYLDQVAQISDGEREESSISRFNGQRAINLDITKIQDANIVAVGDGV
RDEVEVLKTQLPKDVEIKIVHANSDNVKSSLDRVKETILEGAALTVLIVFLFLHSWRSTI
ITGLTLPISVIASFIALHAFGFTLNFMTLMALSLCIGLLIDDAIVVRENIVRHLDMGKNH
VTAARDGTQEIGLAVMATTFAIVAVFVPVAFMKGIIGRFFLQFGVTVTVAVLVSLFVSFT
LDPMLSSIWPDPPENRFKRFPWLGRMMAAIEHLIERVHGIYGRILKRALAWRKATLGLAL
ALFVGSLFLAPLVGTEFIPDTDQGFIALKLKTPVGSSLAYTDSKMHQIEDALRKMPEIDT
ISTTVGTDDGRNAADMNLTLTDRNTSHRISQKDVEKNIRERLKSIPGIELSVGWDKPIYV
AILGPETDKLSAIADQVMLKIGKIKGITDLENSLTAANPSITIKVNNTLASDLGLSVQQI
GAALRPFVSGDANGHWLAADGQNYEVNVQLPKSGRQKIADLGDLSVASSNLDSEGKPIMV
PLRQVVEFVHSSSPRVIKRQDLQRRIGIYANVEGRPSGDVGTEVQAVIKQIELPPGYRFD
VGGRTKDMQEAFGSAMAALGIAVIFIYLILASQFGSFLQPIAIMASLPFSLIGVFLALLI
TGSTLNIFSIIGFIMLMGLVTKNAILLVDFSNREQRGGCSQYDAILTAGQVRLRPILMTT
LAMIFGMLPMALGLGDGGETQAPMGRAVIGGIITSTLLTLVVVPVAYSYLDNWGKRALRF
FKGEHATEAKAAPLANES
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaccaaaatcagtattaaccatccggtattcgctaccatggtgatggtggcg
ttgctggtgctcggcctgttctcttaccaggaactggggctggagcagatgccggacata
cagactccgggcctgctgatcgagatgcgctatccgggcgcctcgccggaggcagtcgag
aacgacatcaccaagccgatcgaagatacgatcaattcggtgagcggcatcaagtctatc
ctttccagttcctatgaaggccgcaattcgacctgggtgacgttcgagctgaacgtcaac
atggaccgggcggtgcaggaagtgcgcgacaagatcgcccagatccggcccggcatgccg
aaagacgccaaggacccgttcattgtccgtggcgatacgctgaatacacaaccgctggct
tccctcagcgtgacgtcgaaaacgcgtagcctgcgcgacctctccaccctgaccgaacaa
atcatcgtcaagcgtttgcaggctgtggcgggggtggccaagatcgatgtcggcggcaat
gtcagccgccaagtgctggtcaatctcaagccggagcagatggcggcgcaaaaagtcggc
gtcgatgaagtcttgaatgcgatccagaccaccaaccaggacatgccggccggcctgatc
acgcgcggcgtctccgaccagctggtgcggctggagggcaagatgaaagacccgcgcgcc
ttcggccagatcatcgtcgcacgccgcggcggcgctccggtctatctcgatcaggtggcg
cagatcagcgacggcgaacgtgaagaatcctcgatctcgcgctttaacggccagcgcgcc
atcaacctggacatcaccaagatccaggacgccaacatcgtcgccgtcggcgatggcgtc
agggatgaggtggaagttctcaagacgcagttgccgaaggacgtagagatcaagatcgtc
cacgccaactcggacaacgtcaagagctcgctcgaccgcgtcaaggaaaccatcctggaa
ggcgcagcgctgacggtgctgatcgtgttcctgttcctgcactcctggcgcagcaccatc
attaccggcttgaccctgccaatctctgtgatcgccagcttcatcgccctgcacgccttt
ggtttcacactgaacttcatgaccctgatggcgctgtcgctgtgcatcggcctgctgatc
gacgacgccatcgtggttcgtgaaaatatcgtacgccatctggatatgggaaaaaaccat
gtcacagcagcccgcgacggcacccaggaaatcggcctggcggtgatggcgaccaccttt
gcgattgtcgccgtgttcgtaccggtcgctttcatgaagggcatcatcggccgcttcttc
ctgcagttcggcgtcaccgtcactgtggcggtgctggtgtccttgttcgtcagctttacg
ctggacccgatgttgtcctcgatctggcccgacccgccggagaaccgcttcaagcgtttt
ccctggctgggacgcatgatggctgccatcgaacacctgatcgagcgcgtccatgggatc
tatggccgcatcctgaagcgtgcactggcttggcgtaaagccacgcttggcctggccttg
gcgctgtttgtcggcagcctgttcctggcgccgctagtgggcaccgaattcattccggat
accgaccagggcttcatcgcgctcaagctcaaaacgcctgtcggctccagcctggcttat
accgacagcaagatgcaccagatcgaagacgcgctgcgcaagatgcctgaaatcgacacc
atcagcacgacagtcggcaccgacgatggccgcaatgcggccgacatgaatctgaccctg
accgatcgcaatacaagccatcgcatctcgcaaaaggacgtcgaaaagaatatccgcgag
cgcttgaaatcgattcccggcatcgaattatcggtgggctgggataaaccaatctatgtt
gcgatcctaggcccggaaaccgacaagctgagcgccatcgccgaccaggtgatgctgaag
atcggcaagatcaaagggatcactgaccttgagaacagcctgactgctgccaacccgtcg
atcaccatcaaggtcaacaataccctggccagcgacctcggcctgagcgtgcagcagatc
ggcgcggccttgcggccgtttgtctcaggcgacgccaacggccactggctggccgctgac
gggcaaaactatgaagtcaacgtgcagctgccgaaatcgggccgccagaaaatcgccgat
ctcggcgacttgtcggtcgccagcagcaatctcgacagcgaaggcaagccgatcatggtg
ccgttgcggcaagtagtggaattcgtgcactcctccagcccgcgcgtgatcaagcgccag
gatttgcagcgccgtatcggcatctacgccaacgtcgaaggccgtccgtccggcgacgtc
ggcaccgaagtgcaagccgtgatcaagcagattgaactgccgccaggctaccgcttcgat
gtcggcggccgcaccaaggacatgcaggaagcgtttggttcagcgatggcggcgctcggt
atcgcggtgatcttcatctacctgatcctggcctcgcagttcggcagcttcctgcagccg
atcgcgatcatggcttcgctgccgttttccctgatcggcgtgttcctggctttactgatt
accggcagcaccttgaatatcttttccatcatcggcttcatcatgctgatggggctggtc
accaagaatgcgatcctgctggtcgatttcagcaaccgcgaacagcgtggcggctgctca
caatacgacgccatcctgaccgcaggccaggtacgcctgcggcctatcctgatgactacg
ctggcaatgattttcggcatgctgccgatggcgctcggcctcggcgatggcggcgaaacc
caggccccgatgggacgcgccgtgattggcgggatcattacctcgaccctactgacgctg
gtggtggtgccggtggcttacagctatctggataactggggcaagcgggccttgcgtttc
ttcaagggagagcatgcgacggaggcaaaagccgcgccgctggcgaacgaatcctga
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integrated database retrieval system
