Collimonas arenae: LT85_3220
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Entry
LT85_3220 CDS
T03512
Name
(GenBank) Cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
care
Collimonas arenae
Pathway
care00260
Glycine, serine and threonine metabolism
care00270
Cysteine and methionine metabolism
care00670
One carbon pool by folate
care01100
Metabolic pathways
care01110
Biosynthesis of secondary metabolites
care01230
Biosynthesis of amino acids
Module
care_M00035
Methionine degradation
care_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LT85_3220
00270 Cysteine and methionine metabolism
LT85_3220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LT85_3220
Enzymes [BR:
care01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
LT85_3220
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Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
VMAP-M7
Motif
Other DBs
NCBI-ProteinID:
AIY42378
UniProt:
A0A0A1FC98
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All DBs
Position
complement(3624826..3626208)
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AA seq
460 aa
AA seq
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MNLASRPAVLDLIGNTPMIEVTRLDTGCCQLFLKLESQNPGGSIKDRIGLSMIDAAEKDG
RLQAGGTVIEATAGNTGLGLALVACAKGYQVILVVPDKMSVEKIQHLKALGAQVHITRSD
VGKGHPEYYQDVAARLAREIPGSFFADQFNNPHNPLAHEQSTGPEIWRQCEQRLDAIVCG
VGSAGTLTGLTRFFRSAQPQLEFVLADPQGSILAEYVNTGKITSTPGSWAVEGIGEDFVP
AIADLSAVKHTYTISDEESFRSARELVRAEGILGGSSTGTLLAAALRYCREQTTPKRVVT
IVADTGTRYLSKVYNDNWMRDQGLLKREILGDLRDIIGRRYADGGVISVASGDTLMTAFN
RMRSAEVSQLPVMAEQGQQVVGIIDESDLLLKVAADPAHFSDPVSSTMTSAIETLAPDAG
LPALRSTLARGLVAIIADDRQFHGLITRFDLLNHLRRSLL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagcaagccgtccagcagtgctggacttgatcggcaataccccgatgatagaa
gtgacgcggctggataccggctgctgtcaattgtttctcaagctggaatcgcaaaatcca
ggcggctccatcaaggatcgcatcggcttgtcgatgatcgacgcggccgagaaggacggt
cgcctacaggccggcggcaccgtgattgaagccactgccggcaacacaggtctcggcttg
gcgctggtggcctgcgccaaaggttatcaggtgatcctggtggtgccggacaagatgtcg
gtagaaaaaatccagcacctgaaagccttgggcgcgcaagtccatattacccgttccgat
gtcggcaaaggccatcccgagtattaccaggatgtcgcggcgcggttggcgcgcgagata
ccgggatcgttctttgccgaccagttcaataatccgcataatccgctggcgcatgaacaa
agcaccggccccgaaatctggcggcaatgcgagcaacggctcgacgccatcgtttgcggc
gtcggttcggccggcacgctgactggcctgacgcgttttttccgcagcgcgcagccgcaa
ctggagtttgtgctggccgatccgcaaggatcgatccttgcggaatatgtgaacacagga
aagatcacgtcgacgccaggttcctgggccgtcgaaggcatcggcgaagatttcgtcccg
gcgattgccgacctctccgccgtcaagcatacctataccatcagcgacgaggaaagtttc
cgtagcgcgcgcgaactggtacgggcagagggcattcttggtggctcctctaccggcacc
ttgctggcggcagccttgcgatattgtcgcgagcagaccacacccaagcgtgtggtgacc
atcgtcgccgataccggtacgcgttacctgtccaaggtatacaacgacaactggatgcgc
gaccagggtttgctcaagcgcgaaatacttggcgatctgcgcgacatcatcggccgccgc
tacgccgacggtggcgtcatcagcgtcgcatctggcgacaccctgatgacggcgttcaac
cgcatgcgcagcgccgaagtgtcgcagttgccagtaatggcagagcagggccagcaagtg
gtcgggattatcgatgaatccgatctgctgctcaaggttgccgccgatccagcccatttc
agcgatccggtcagcagcaccatgaccagcgccatagaaacgcttgcgcccgatgccggc
ctgcctgctttgcgcagcacgctggcgcgcggcctggtcgccatcattgccgacgatcgt
cagtttcatggcttgatcacccgtttcgatttactcaatcatcttcgaaggagtctgtta
tga
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