Clostridium asparagiforme: NQ535_11490
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Entry
NQ535_11490 CDS
T08571
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
casp
Clostridium asparagiforme
Pathway
casp01501
beta-Lactam resistance
casp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NQ535_11490
01503 Cationic antimicrobial peptide (CAMP) resistance
NQ535_11490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
casp03036
]
NQ535_11490
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_11490
01504 Antimicrobial resistance genes [BR:
casp01504
]
NQ535_11490
Chromosome and associated proteins [BR:
casp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NQ535_11490
Transporters [BR:
casp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NQ535_11490
Antimicrobial resistance genes [BR:
casp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NQ535_11490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
CwsA
TPR_24
Motif
Other DBs
NCBI-ProteinID:
UWO78862
LinkDB
All DBs
Position
2471413..2472486
Genome browser
AA seq
357 aa
AA seq
DB search
MKKKTILIAGAVVLLAAGGILFRVIKGMEKPAEYETRPTVSAEAPQTGDIVLYTDLTGTV
EPQSRAAVMPKIGGEVLEVYFQAGDQVQAGQALLKIDSDALTSLKLQMESAKVAADEAAR
EYGRIEPLYAGGYASQQSMEQARDGAESARLAYEAAKHQYDLQLEYTSVTAPISGTVETR
NVEPHDHVSTGTEVCVISAGDQVQVEFGVTEKTRSNLAAGDTVAISKNGTDYSGRVTEIG
SMVNPSTGLYDVKAEVDRADGLTSGTRVKLTAVLDQARGVMTVPVDAVNYAAGQPFVYCY
EDGVAKKTMILGGIYDSQRMEVKSGLQPDSQVITSWSNELVDGANVLLEEAQQEAGE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaacgatattgattgcgggggcggtcgtcctgttggcggccggagggatt
ctctttcgcgtgatcaaaggaatggaaaaaccggcggagtatgagacgcgtcccacggtt
tccgcggaggctccgcagaccggggatattgttttgtacacggacttgacgggcacggtg
gagccacagtccagggcggcggttatgccgaaaatcggcggcgaggtgctggaggtgtat
ttccaggccggggaccaggttcaggcggggcaggcgctgctaaagatcgattccgacgcg
ctgacctccttaaagcttcagatggagtcggcaaaggtggcggccgacgaggcggcccgg
gagtacgggcggattgagccgctctacgccgggggctacgcgtcccagcagtccatggaa
caggccagggacggagccgagagcgccaggctggcctacgaggccgccaagcaccagtac
gatctgcagctggagtacacttcggtgaccgctcccataagcggcacggtggagacacgg
aatgtggaaccccacgaccacgtttccaccggcaccgaggtctgcgtgatctcggccggg
gaccaggttcaggtggaattcggcgtgacggagaaaaccaggtccaatctggcggccggg
gatacggttgcgatctcgaagaacggcacggattacagcggccgggtgacggagatcggt
tccatggtgaatccgtccaccgggctgtacgatgtgaaggcggaggtggaccgggcggac
ggcctgacgagcggcaccagggtaaagctgactgcggtgctcgaccaggcacggggcgtg
atgacagtgccggtggacgcggtgaactacgcggcaggccagccctttgtgtactgttat
gaggacggcgtggcgaaaaagacgatgattcttggcggaatctacgattcgcagcgcatg
gaagtgaaatcggggcttcagccggacagccaggtgatcaccagctggagcaacgagctg
gtggacggggcaaacgtccttctggaagaagcgcagcaggaagcgggtgagtaa
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