Clostridium asparagiforme: NQ535_22960
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Entry
NQ535_22960 CDS
T08571
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
casp
Clostridium asparagiforme
Pathway
casp01501
beta-Lactam resistance
casp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NQ535_22960
01503 Cationic antimicrobial peptide (CAMP) resistance
NQ535_22960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
casp03036
]
NQ535_22960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_22960
01504 Antimicrobial resistance genes [BR:
casp01504
]
NQ535_22960
Chromosome and associated proteins [BR:
casp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NQ535_22960
Transporters [BR:
casp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NQ535_22960
Antimicrobial resistance genes [BR:
casp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NQ535_22960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CzcB
Biotin_lipoyl
HH_YBHG
BSH_CusB
RND-MFP_C
BSH_YknX
CzcB_C
HH_EMRA
BSH_YhbJ
BSH_LcnD
PTS_EIIA_1
RnfC_N
HH_MFP_RND
HH_CzcB
TarH
BSH_RND_rel
Cadherin_FAT4_N
Motif
Other DBs
NCBI-ProteinID:
UWO75663
LinkDB
All DBs
Position
complement(5099191..5100378)
Genome browser
AA seq
395 aa
AA seq
DB search
MRRKKAMIIGGATVVAVAAAVLLLGGGKNKASGGPAGGPRGGAVSANVPVVKAVNPTQGD
IRLTSGLTGTVEPADVVYVYAKASGDVTGVMVKAGDTVTAGQVLCEIDTKQVETARNSLD
SAEVSLSEARSNLNRMQILYASGDLSAQDYEQYSNKAKSAQLQYESAKLAYDRQVEYSTV
TAPIGGRVESCDIEVHDSVGQSTQLCVIAGEGDKRVSFYVTERMMANITVGDQLDITKNG
VTYKAYVSEISAMVDSDTGLFKVKAQLEGADAIPTGSTVKLSLVTDRTENAMLVPVDAIY
YSNGDGYVYLYRNGVVERTAVEVGIYDSQNAEILGGLNRDDLVISTWSSDLYEGAKVELK
GADGSGDAAGQPSGEAAGQETGPAGGAGGQGARAR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggaaaaaagcgatgataatcggcggcgcgacggtagtggctgtagctgccgcc
gttctgttgctggggggaggaaagaacaaggcgtcaggaggtcccgcaggggggccgcgg
ggaggagctgtgtcggccaacgtgccggtggtaaaagcggtgaatcccacccagggagat
atccggctgacttcgggcctcaccggcacggtggagcctgcggatgtggtttacgtgtac
gccaaggcgtcaggggatgtgaccggggtgatggtgaaggccggggatacggtgacggcc
ggtcaggtgttatgcgagatcgataccaaacaggtggagactgccagaaattccctggat
tcggcggaggtgtccctgtccgaggccaggagcaatttaaaccgaatgcagattctctac
gccagcggcgatctgtcggcccaggactacgaacagtacagcaacaaggccaagtccgcc
cagctgcagtacgagtccgccaaactggcctacgaccggcaggtggagtacagcaccgtg
accgcgcccattggcggccgggtggagagctgcgacatcgaggtgcacgacagcgtgggc
cagtccacccagctctgcgtgatcgcaggcgagggcgacaagcgggtgtccttctatgtg
acggagcggatgatggccaatatcaccgtgggggaccagctggacattacgaaaaacggc
gtaacctacaaggcgtacgtcagcgagatcagcgccatggtggactcggataccggcctg
ttcaaagtgaaggcccagttggagggcgcggacgccattcccacgggaagcacggtcaag
ttgagtctggtgacggaccgcacggaaaatgccatgctggtgcccgtggacgccatctac
tacagcaacggcgacggatacgtgtacctttaccggaatggagtggtggagcgcaccgcc
gtggaggtgggaatttacgactcccagaacgctgagattttgggggggttgaatagggac
gatctggtgatcagcacctggagttccgatttgtacgagggggcgaaggtggagttaaag
ggggcggacggctcaggcgatgcggccggtcagccctcaggcgaggcagccggccaagaa
acgggcccggcaggaggcgcaggcggccaaggcgcccgggcgcggtag
DBGET
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