Clostridium asparagiforme: NQ535_25200
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Entry
NQ535_25200 CDS
T08571
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
casp
Clostridium asparagiforme
Pathway
casp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ535_25200 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
casp03400
]
NQ535_25200 (nth)
Enzymes [BR:
casp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NQ535_25200 (nth)
DNA repair and recombination proteins [BR:
casp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQ535_25200 (nth)
Prokaryotic type
NQ535_25200 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
RecR_HhH
DUF2400
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UWO76059
LinkDB
All DBs
Position
complement(5589332..5589991)
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AA seq
219 aa
AA seq
DB search
MARRETKAQQAERIQKILAALDREYGTEYRCYLNHETPWQLLIAVIMSAQCTDARVNMVT
ADLFRKYDTLEKFANADLKELEQDIHSTGFYHMKAKNIIACCRDLVDKHGSEVPRTIEEL
TALAGVGRKTANVIRGNIYNEPSIVVDTHVKRISRKLGLTKSEDPVKIEQDLMKALPRDH
WILWNIHIITLGRSICIARRPKCGECFLREFCPGREDEG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgagagacaaaagcgcagcaggcggagcggatccagaagatattggcggca
ctggaccgggagtacggcacggaataccgctgctatttgaatcatgaaaccccatggcag
ctgttgatcgccgtgattatgagcgcccagtgcacggacgcccgggtcaacatggtcacc
gccgatctgttccgcaaatacgacaccctggagaagtttgcgaatgccgacttgaaggag
ctggaacaggatattcactccacgggcttttaccatatgaaggccaaaaatattatcgcc
tgctgccgcgacctggtggacaagcacggcagcgaggtgccgcggaccattgaggagctg
acggcactggccggggtgggccgcaagaccgccaatgtgatccgcggaaatatctacaat
gaacccagcatcgtggtggacacccatgtaaagcggatttcccgcaagctgggcctgacc
aaatccgaggacccggttaaaatcgagcaggatctgatgaaggcgctgccaagggatcac
tggattctctggaatatccacattattaccctgggccgcagcatctgcatcgcccgccgt
cccaagtgtggggagtgcttcctgcgggagttctgtccggggcgggaggatgagggataa
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