Clostridium asparagiforme: NQ535_25325
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Entry
NQ535_25325 CDS
T08571
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
casp
Clostridium asparagiforme
Pathway
casp01501
beta-Lactam resistance
casp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NQ535_25325
01503 Cationic antimicrobial peptide (CAMP) resistance
NQ535_25325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_25325
01504 Antimicrobial resistance genes [BR:
casp01504
]
NQ535_25325
Transporters [BR:
casp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NQ535_25325
Antimicrobial resistance genes [BR:
casp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NQ535_25325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
LRR_NXF1-5
Motif
Other DBs
NCBI-ProteinID:
UWO76083
LinkDB
All DBs
Position
complement(5618292..5621327)
Genome browser
AA seq
1011 aa
AA seq
DB search
MGLTKLVLKRPVTTVLMILCLVVFGLQAFMSSPLELMPEMNMSMIVVMTPYPGASPEDVN
DLVTKTVEDQVGTLSGLDTVSSMSRENVSITMLEYKYGTDMDKAYDDLKKQMDLAKVSMP
DEVEDPIMLELNANLMANMILAVSKDNTDNLYNYVNDDVVPELEKLSSVAEVSINGGSQE
YIRVELLPEKMSQYGVSMNSIATDIGSADLAYPAGNADLGDQQLAVSTDQKFDTLETLQD
IPLTVSGKNTIYLGDVANIYLGEDDTTSIARYNGQDTIAVSVTKQQDAASLTLSSDVNDV
IEELTAADPDLNVTVVMDTKDNIMSSLTSVFQTMIAAIVISMAIIWLFFGDIKASLIVGS
SIPVSILASFVLMNLMGFSLNVITLSALVLGVGMMVDNSTVVLESCFRATTDTGFREFSK
AALNGTGVVYQSVVGSTLTTCVVFLPLAMLSGMTGEMFRPLGFTIVFCMVASLISAITVV
PLCYMNYKPVEKKTAPLSRPVEKMQQEYRRIMRRFLRHKGLVMLSSVALLALSIVLAMNL
RTELMGEDDMGQITVEVETKPGLQLGIVEDILNQVEEVVSADPNVEDYLTQSGGGGLSSS
MSSNPTVSAYLKKDRDMETDDVVKLWRKELESIPNCNITVSANSTIGSMMGTSDTYQVIL
QSTNYDALKADSDRIVSALDARSEVTKVHSDLENAAPVVKVRVNPIKAKAAGLSAAQIGG
TLNSMLSGVNPASLEIDGRDVDIKVEYNKDRYKTLAQVQNIVLQTPTGGAVALTDVADLV
FEDSPATIRRQDKQYRVTITGTYTDKATETTEKQLQTEVVTPQLSQGVSIAMNSMQKSMQ
KEFTNLGKAIAMAIFLVFVVMACQFESPKFSIMVMTTVPFCLIGAFGLLWIVDSAISMTS
LLGFLMLVGTVVNNGILYVDTVNQYRQSMDMETALIEAGATRLRPILMTTLTTVLSMLPM
ALALGDSGETTQGLALVNIGGLTASTILALLMLPAYYSVMNRGGKQSLMAD
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaacaaaactagtcctgaaacggccggtgaccacggtactgatgatcctgtgc
ctggtggtgttcggtcttcaggccttcatgtcatcgcctcttgagctgatgccggaaatg
aacatgtccatgatcgtcgtgatgacgccctatcccggcgccagccccgaggacgtgaac
gatctggtcaccaagacggtggaggatcaggtgggaaccttgagcggtctggacaccgta
tcctctatgtcccgtgagaacgtgtccatcaccatgctggaatacaagtacggcaccgat
atggataaggcttacgacgatctgaaaaagcagatggatctggccaaggtcagcatgccg
gacgaggtggaagatcccatcatgctggagctgaacgccaacctgatggccaacatgatc
ctggcggtcagcaaggacaacaccgataacctctataactatgtaaacgacgacgtggtg
ccggagctggagaagctgtcctccgtggcggaggtatccatcaacggcggcagccaggag
tacatccgcgtggagctgcttcccgagaagatgagccagtacggcgtgagcatgaactcc
atcgcaacggacatcggcagcgccgacctggcttacccggccggcaacgccgatctgggc
gaccagcagctggccgtgtccacggaccagaaattcgacaccctggagacgcttcaggac
atcccgctgacggtttccgggaagaacaccatctatctgggcgatgtggccaatatttac
ctgggtgaggatgacactaccagtattgcccgctataacggtcaggacacgatcgcggtt
tccgtgaccaagcagcaggatgcggcctccctcaccctgtcctccgacgtcaacgatgtg
attgaggagttaacggctgcggatccggacctgaacgttacggtggttatggataccaag
gacaacatcatgtcctcccttacctccgtgttccagaccatgatcgccgcgattgtgatt
tccatggccatcatctggctgttcttcggcgacatcaaggcatccctgatcgtcggaagc
tccatcccggtatccatcctggcctcctttgtgctgatgaacctcatgggcttctccctg
aacgtgatcaccctcagcgccctggtgctgggcgtcggcatgatggtggataactccacg
gttgtgctggagagctgcttcagggccaccacggacacgggcttcagggaattttccaag
gcggccttaaacggtaccggcgtggtgtaccagtcggttgtgggttccacgctgaccacc
tgcgtggtgttcctgcccctggcaatgttgagcggtatgaccggcgagatgttccgcccc
ctgggcttcaccatcgtgttctgtatggtggcgtccctgatttcggctatcaccgtggtt
ccgctgtgctacatgaactataagccggtggaaaaaaagacggctcccctgtcccgcccg
gtggaaaagatgcagcaggaataccgcaggatcatgagacgtttcctgcggcacaaaggg
ctggttatgctctcctccgtggcgctgctggcgctgtccatcgtgctggccatgaacctg
agaaccgagctgatgggcgaggacgacatgggtcagattacggtggaggtggagaccaaa
ccgggtctgcagcttggaattgtggaagatattttgaaccaggttgaggaggttgtgagc
gccgaccccaatgtggaggattacctgacccagtcgggcggcggcggcctgagcagcagc
atgagctccaaccccacggtttccgcctatctgaaaaaggaccgggatatggaaactgac
gacgtggtaaagctctggagaaaagagctggagagcatacccaactgtaacatcacggtc
agcgcaaactcgaccatcggttccatgatgggaaccagcgacacctaccaggtgattctg
cagagcaccaactacgatgcgctcaaagcggacagcgacaggatcgtttcggcgctggat
gcgcgctctgaggtgaccaaggtgcactccgacctggagaacgcagccccggtggtgaag
gtgcgcgtcaaccccatcaaggccaaggccgcagggctgtccgccgcacagatcggcggc
accttaaacagcatgttaagcggcgtgaaccccgcatctctggagatcgacggccgcgac
gtggatattaaggttgaatataataaagaccggtataagactcttgctcaggttcagaat
atcgtacttcagacgcccaccggaggagcggttgcgctgacggacgtggcggacctggtg
tttgaggacagcccggccacgatccggcgtcaggataagcagtaccgcgtgaccatcacc
ggcacctataccgacaaggcgacggagactacggagaaacagcttcagacagaggttgtg
acgccgcagctgagccagggcgtttccattgctatgaacagcatgcagaagtccatgcag
aaggagttcaccaacctaggcaaggccattgcgatggcgattttcctggtattcgtcgtg
atggcgtgccagttcgagtcgcctaagttctcaatcatggttatgaccaccgtgcccttc
tgtctgatcggcgcattcggtctgctgtggattgtggacagcgccatcagcatgacctcc
ctgctgggcttcctgatgctggtcggtacagttgttaacaacggtattctgtatgtggat
acggtgaaccagtaccgccagagcatggatatggagacggctctgatcgaggcgggtgca
acccgtctgcgtcccatcctgatgaccaccctgaccacggtgctgtccatgctgcccatg
gcgctggcgctgggcgattcgggcgagaccacccagggtctggctctggtaaacatcggc
ggcctgacggcctccaccattctggcgctgctcatgctgcccgcttactacagcgtgatg
aaccgcggcggaaaacagagtctgatggcggattaa
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