Clostridium asparagiforme: NQ535_25330
Help
Entry
NQ535_25330 CDS
T08571
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
casp
Clostridium asparagiforme
Pathway
casp01501
beta-Lactam resistance
casp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NQ535_25330
01503 Cationic antimicrobial peptide (CAMP) resistance
NQ535_25330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
casp03036
]
NQ535_25330
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_25330
01504 Antimicrobial resistance genes [BR:
casp01504
]
NQ535_25330
Chromosome and associated proteins [BR:
casp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NQ535_25330
Transporters [BR:
casp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NQ535_25330
Antimicrobial resistance genes [BR:
casp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NQ535_25330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
YknX_C
BSH_CzcB
Biotin_lipoyl
RND-MFP_C
HH_YBHG
BSH_YknX
HH_MFP_RND
BSH_CusB
PTS_EIIA_1
HH_EMRA
HH_CzcB
OEP
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
UWO76084
LinkDB
All DBs
Position
complement(5621343..5622434)
Genome browser
AA seq
363 aa
AA seq
DB search
MKRAIWAVVIVVIAVFLFLRLTKKTEFAEATADPVVTVEKPHMGDVRLSTQLIGTIEPAD
VVYIFPKVGGDITAVNIKAGDTVTAGQVLVEIDTKQVDAVRTSMEAAKVSAESAQNVLNR
MTPLYQAGYISAQDYDGYKAQADAARLQYEAAQINYNNQLEFSNVTSPISGRVEQCNVEL
HDTVGQSTQLCVIAGENGKVVSFYTTEKVKNNLNPGDPVVLNKDGVDYNGTITEVSNMAD
AGVGLFKVKASVDDNNTMTPGTDVELEVPKDSALNAMLVPTHSVYYRGGDAFVYTYDAGE
SVIREVPVEVGIFDTENIVIKSGLTMDDQVLTTWTSELKDGYKVSLADGEAAAEANQAEA
AAE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgtgcaatttgggcggttgtgatcgtggtcatagccgtgttcctgtttttgcgc
ctgacaaagaagacggaattcgcagaggctacggcggacccggtggtgacggttgagaaa
ccgcacatgggcgacgtgcgtctgtccacccagctgatcggcaccatcgagccggcggat
gtggtatacattttccccaaggtcggaggcgatatcaccgcggtgaacatcaaggccggg
gataccgtgacggcgggacaggtgctggtggagatcgacaccaagcaggtggatgcggtc
aggacctccatggaggcggccaaggtgtccgcggagagcgcgcagaacgtgttgaaccgc
atgacccccctgtatcaggccggttacatatccgcccaggactacgacggctacaaggcc
caggcggacgcagccagacttcagtatgaagcggcgcagatcaattacaacaatcagctg
gaattcagcaacgttaccagccccataagcggccgggtggagcagtgcaatgtggagctt
cacgacacggtcggccagtccacccagctctgcgtgatcgcgggtgagaacggcaaggtg
gtttccttctataccactgagaaggtgaaaaacaatctgaacccaggagatcccgtggtt
ctcaacaaggacggcgtggattacaacggaaccatcaccgaggtcagcaacatggcggat
gcaggcgtgggcctgttcaaggtcaaggcctccgtggacgacaacaataccatgacgccg
ggaacggacgtggagcttgaggttcccaaggattccgctctgaacgccatgctggtgccc
acccacagcgtgtactaccgcggcggggacgcatttgtctacacctacgatgccggtgag
agcgtgatccgggaggtgccggtggaagtgggaatctttgatactgagaatattgtgatc
aagtccggcctgaccatggacgatcaggtacttaccacctggacttccgagctgaaggac
ggctacaaggtgtcgctggcggacggcgaggcagctgccgaagcgaaccaggcagaagct
gcggctgagtaa
DBGET
integrated database retrieval system
