Clostridium asparagiforme: NQ535_26085
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Entry
NQ535_26085 CDS
T08571
Name
(GenBank) response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
casp
Clostridium asparagiforme
Pathway
casp01502
Vancomycin resistance
casp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NQ535_26085
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NQ535_26085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
casp02022
]
NQ535_26085
01504 Antimicrobial resistance genes [BR:
casp01504
]
NQ535_26085
Two-component system [BR:
casp02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
NQ535_26085
Antimicrobial resistance genes [BR:
casp01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
NQ535_26085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
RuvA_N
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
UWO76227
LinkDB
All DBs
Position
complement(5766292..5766996)
Genome browser
AA seq
234 aa
AA seq
DB search
MPDINILVVDDEKEIADLIEIYLVSDGYKVFKAENAARGLEILEKEEIHLVLLDIMMPGM
NGLEMCKKIRENNNIPIIMLSAKSTDLDKILGLGTGADDYVVKPFNPLELTARVKSQLRR
YTQLNPNSGSREQANNEITIKGMVINKDNHKVIVDDEEIKLTPIEFDILYLLASNPGRVF
STDEIFEKVWNEKVYEANNTVMVHIRRLRGKLKEDTRQSKIITTVWGVGYKIEK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatattaacattctggtagttgacgacgagaaagaaatcgcggatctgattgaa
atctatctggtgagcgatggctataaagtattcaaggctgagaacgcggccagaggcctg
gagattctggagaaggaggagatccacctggtgctgcttgacatcatgatgcccggtatg
aacggcctcgagatgtgcaagaagatccgggagaacaacaacatcccgattatcatgctc
agcgccaagtccacggacttagataagattctgggcctgggaaccggggccgacgactat
gtggtgaagcccttcaatcccctggagctgaccgcccgggtgaagtcccagctgcgccgc
tacacccagctgaaccccaacagcggttccagagagcaggccaacaacgagatcaccatc
aagggcatggtgatcaacaaggacaaccacaaggtgatcgtggacgacgaggagatcaag
ctcacccccatcgagttcgacattctctatctcctggcctccaaccccggcagggtgttc
agcacggacgagatcttcgagaaggtttggaacgagaaggtctatgaggccaacaatacc
gttatggtacatatcagaaggctgagaggcaagctgaaggaggacaccagacagagcaaa
atcattacgacagtgtggggagtagggtacaaaattgaaaagtga
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