Castellaniella sp. MT123: ABCV34_09620
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Entry
ABCV34_09620 CDS
T11683
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cast Castellaniella sp. MT123
Pathway
cast00540
Lipopolysaccharide biosynthesis
cast01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cast00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ABCV34_09620 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cast01005
]
ABCV34_09620 (lpxC)
Enzymes [BR:
cast01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
ABCV34_09620 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cast01005
]
Lipid A
ABCV34_09620 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
XAP00121
LinkDB
All DBs
Position
complement(2059138..2060061)
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AA seq
307 aa
AA seq
DB search
MLLQRTLKQSISTKGVGLHSGRRVEITLRPAEPNTGIVFHRVDLPEIVDLPARADAVGDT
RMASVLQQGSVRVSTVEHLMSALAGLGVDNLHVDLDAEEVPIMDGSAGTFVYLLRSAGLL
EQAAPKRFLRVLKPVEVREGEGPAAKWARLEPYDGFALSFSIDFHHPAINSTANAAEVDF
ARDSYVKTIARARTFGFASEVEALRSMGLARGGSLDNAIVMDEYRVLNADGLRYDDEFVK
HKILDAIGDLYLAGKPLVARYVACKSGHALNNQLVRALLAQQDCWELISYESRDAAPAAF
TRDWQLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcttttacagcgcaccctcaaacaatcgatttccacaaaaggcgtgggcctgcactcc
ggccgccgtgtggaaatcacgttgcgtcccgctgaacccaacaccgggattgtgttccac
cgggtggatctgcctgaaatcgtcgatctgccggcgcgcgccgacgcggtgggcgatacc
cgcatggcgtcggtgctgcagcagggatcggtgcgcgtttccaccgttgaacacctgatg
tcagccctggccgggcttggggtggacaatctgcacgtggacctggacgccgaggaagtc
cccatcatggacggtagcgcgggcactttcgtgtatctgctgcgcagcgccggcctgctg
gaacaggctgccccgaaacggttcctgcgcgtgctcaaacccgtcgaggtccgcgaaggc
gaaggcccggccgccaaatgggcgcggctcgaaccctacgatgggttcgccctgtcgttt
tccatcgatttccaccatccggccatcaactcgacggccaatgcggccgaggtcgatttc
gcccgggactcctacgtcaagaccatcgcgcgggcccgcaccttcggcttcgccagcgaa
gtcgaggccctgagatccatgggcctggcgcgtggcggcagcctggacaacgccatcgtc
atggacgaataccgcgtgctcaatgccgacggcctgcgctatgacgacgaattcgtgaaa
cataagatcctcgatgcgatcggggatctgtatctggccggcaagcccctggtggctcgc
tatgtggcctgcaaatcgggccacgccctgaacaaccagctggtccgggccttgctggcc
cagcaagactgctgggaactcatcagctacgaatcccgtgacgcggcgcctgccgcattc
acccgggactggcagctggcctga
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