Cygnus atratus (black swan): 118243387
Help
Entry
118243387 CDS
T09349
Symbol
HMGCS2
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00280
Valine, leucine and isoleucine degradation
cata00650
Butanoate metabolism
cata00900
Terpenoid backbone biosynthesis
cata01100
Metabolic pathways
cata03320
PPAR signaling pathway
Module
cata_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
118243387 (HMGCS2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
118243387 (HMGCS2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
118243387 (HMGCS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118243387 (HMGCS2)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
118243387 (HMGCS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Motif
Other DBs
NCBI-GeneID:
118243387
NCBI-ProteinID:
XP_035393290
LinkDB
All DBs
Position
8:9245680..9249006
Genome browser
AA seq
508 aa
AA seq
DB search
MLRLVGRAARCWGARRGPARAPRVSQCPAATQPARLSSTAAAVASTGTWPKDVGILALEV
YFPAQYVEQAELERYDGVEAGKYTRGLGQQQMGFCAAHEDINSLCLTVVQRLVERGRLSW
DAIGRLEVGTETVIDKSKAVKTVLMELFRDSGNSDVEGIDTTNACYGGTASLFNAAAWVE
SSAWDGRYAVVVCGDIAVYATGNARPTGGAGAIAMLVGPNAPLVLERGLRGTHMEHAYDF
YKPDLASEYPVVDGPLSIQCYLRALDRCYAVYRRKAESQWQKAGIHRPFTLDDFKFIIFH
TPFCKLVQKSVGRLLLNDFLAAPNPDTASGVYKGLQPFRGVKLEDTYTSKEVEKAFQAAS
QEIFNQKTKPSLLLSSRNGNMYTPSMYGCLASLLAQCSAQDLAGSRIGAFSYGSGLAASM
FSLRVSQDATPGSPLDKLLSSLADLPTRLDTRKRVAPQDFAEIMKRREETHHLANHTPHG
SHTDLFPGTWYLERVDDKYRRQYARKPL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcttggtcggccgcgctgcacgctgctggggggcgaggcgggggccggcacgg
gcgccccgggtgtcccagtgccccgcggccacgcagccggcacgcctctccagcactgcc
gcggcggtggccagcacgggtacctggcccaaggacgtgggcatcctggcgctggaggtg
tacttccccgcacagtacgtggagcaggcagagctggagcgctacgacggcgtggaggcc
ggcaagtacacgcggggcctgggccagcagcagatgggcttctgtgccgcgcacgaggac
atcaactccctgtgcctgacggtggtgcagcggctggtggagcgcggccgcctctcctgg
gacgccatcggccgcctcgaggtgggcaccgagactgtcatcgacaagtccaaggccgtc
aagaccgtcctcatggagctcttccgcgactcgggcaacagcgacgtggagggcatcgac
accaccaacgcctgctacggcggcacggcctcgctcttcaacgccgccgcctgggtcgag
tccagcgcctgggacggccgctacgccgtggtggtgtgcggggatatcgccgtctacgcc
acggggaacgcgcggcccacgggaggtgccggcgccatcgccatgctggtgggacccaac
gcccccctggtgctggagagaggcctgcggggaacccacatggagcatgcctacgacttc
tacaagcctgacctggcctccgagtacccggtggtggacgggcctctgtccatccagtgc
tacctgcgggcgctggaccgctgctacgccgtgtaccgcaggaaggcggagagccagtgg
cagaaggccggcatccaccggcccttcacccttgatgacttcaagttcatcattttccac
acgcccttctgcaagctggtgcagaagtcggtggggcggctgctgctcaacgacttcctg
gctgcccccaaccccgacacggccagcggtgtctacaaggggctgcagccttttcgcggc
gtgaagctggaggacacctacaccagcaaggaggtggagaaggcgttccaggcggccagc
caggagatcttcaaccagaagaccaagccctcgctgctcctctcctcccgcaacggcaac
atgtacacaccgtccatgtacggctgcctggcctccctcctggcacagtgctcggctcag
gacctggccggctccaggatcggcgccttctcctacggctcggggctggccgccagcatg
ttctccctccgcgtctcgcaggacgccaccccgggctcacccctggacaagctgctctcc
agcctggccgacctgcccacccgcctggacacccgcaagcgcgtggccccgcaggacttc
gccgagatcatgaagcgccgggaggagacccaccacctggccaaccacactccccacggc
tcccacacggacctcttccccggcacctggtacctggagcgggtggacgacaagtaccgg
cggcagtacgccaggaagcccctctag
DBGET
integrated database retrieval system
