Cygnus atratus (black swan): 118244124
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Entry
118244124 CDS
T09349
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X2
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cata01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118244124 (DSE)
Enzymes [BR:
cata01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
118244124 (DSE)
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Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
118244124
NCBI-ProteinID:
XP_035394797
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Position
3:52075668..52110773
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AA seq
772 aa
AA seq
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MYETSYRRGWGFQYLHNHQPTNCVALLAGSLVLMNQGYLQEAYLWTKQVLAIMEKSVVLL
QEVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFSHPWLKQHFAFMYRTVLPGFQR
TVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLAEQIRRNRVVEGPGTPSKGQRWCTL
HTEFLWYDASLRSVPPPDFGVPKLHYFEDWGVVTYGSALPAEINRPFLSFKSGKLGGRAI
YDIVHKNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFS
PAVSKSCFSPWEGQITEDCSSKWLKYKHDLAGDCQGRVVAAMERSGVVFIRGEGVGAYNP
KLKLRKLQRNLILLHPQLLLVVDQIHLEDDSPLEAATSFFHNVDVPFEETVVDEVHGAFI
RHRDGIYKMYWMDDTGHSEKATIASRMYPRGYPYNGTNYVNVTTLLRHPVTRAIYLFIGP
SIDVQSFTVRGDSRQLDVFVTTSEHAYAIYLWTVEEGPRSAFAQVIADRQKIVFDRASAI
RSSAVPEVKDYVGIVEKNLQHFKPVFQQLEKQILSRVRNTASFRKTAERLLRFSDKRQTE
EAIDRIFAISQRQQQQRGRAKKNRKVAKGYKFVDAVPDIFAQIEVNERKVRQKAQTQAQK
ELPVDEDEEMKDLLDFADITYVKHKTGVSIKGRSGLAQMVTTARSSAPSISASYTRLFLI
LNIAIFFVMLAMQLTYFQKAKRLHGQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaacatcatacagacgtggatggggtttccagtaccttcataaccaccagcct
accaactgtgtggccctgctggctggaagcctggttctgatgaatcaaggctaccttcag
gaagcttacctgtggaccaagcaagtgttggcaatcatggagaagtcagtggtcctgctg
caggaggtcacagatggctcgctctatgaaggggtggcttatggcagctacacaaccaga
tcgttgtttcagtacatgtttcttgtccaaaggcactttgatatcaatcacttcagccac
ccctggctcaagcagcactttgcatttatgtacaggactgtcctgccagggtttcagaga
actgtggccattgcagactccaactacaactggttctatgggccagagagccagctggtg
tttcttgacaaatttgtcatgcgcaacggcagcgggaactggttggcagagcagatcaga
aggaaccgggtggtggagggcccggggactccatccaaagggcagaggtggtgcacgctc
cacactgaatttctctggtatgatgcaagtttgcgctctgtacctccaccagacttcggg
gttccaaagctgcattactttgaggactggggagtggtaacctatggaagtgctttgcca
gctgaaatcaacaggcctttcctttccttcaagtcaggaaagctgggaggacgtgcaata
tatgatattgttcataagaacaagtacaaagagtggatcaagggatggaggaactttaat
gctggtcatgaacacccggaccagaactcctttacttttgctcccaatggtgtacctttc
ataacggaagctctgtatgggccaaaatatactttttttaataatgtgttgatgttttcc
cctgctgtgtccaagagctgcttctccccatgggaagggcagattacagaggattgttct
tcaaagtggcttaaatataaacatgacttggctggtgactgtcagggacgagtggttgct
gccatggagagaagcggggtggtttttatcaggggagaaggagtgggtgcatacaatcct
aaactgaagctgagaaaattgcaaagaaacctcatacttctccatcctcagcttctgttg
gtggtggaccaaatccacttagaagatgacagccccttggaggcagcaaccagtttcttc
cacaatgtggatgtgccttttgaagaaacagttgttgatgaggtccatggggcatttatt
agacaccgtgatgggatatataaaatgtactggatggatgatactggccacagtgagaaa
gctaccattgcctcaaggatgtatccccggggctacccttacaacggaacgaactacgtg
aatgtaacaaccctcttgcggcaccccgtcacgagagccatttacctgttcattggaccc
tccatcgatgtgcagagcttcacggtccgtggagactctcggcaactggatgttttcgtt
accaccagtgagcacgcctatgcaatttacctgtggactgttgaggaagggccccgctct
gcctttgcacaggttattgcagaccgccagaaaattgtctttgaccgagcctctgccatt
aggagctctgcagtgccagaagtgaaggactacgtagggattgtggagaagaacctgcag
cattttaagccagttttccagcagctggagaagcagatactgtctcgtgtacgaaacaca
gctagctttaggaagactgctgagcgcctgttgaggttttcagataaaagacagacagag
gaggccattgacagaatatttgcaatctcacagaggcagcaacagcagcgtggcagagca
aagaaaaatagaaaggtagccaaaggctacaaatttgttgatgctgttcctgacattttt
gcacaaattgaggtaaatgaaagaaaagtgcgtcaaaaggcacagactcaagcacaaaaa
gagttgcctgtagatgaagatgaggaaatgaaagatcttttggattttgcagatatcact
tatgtgaagcacaaaactggagtgtcaatcaaaggccgatcagggctggcacagatggtg
acaactgctcgaagtagcgccccatcaatatcagcctcttatacccgcctctttctcatt
ctcaacattgctattttttttgtcatgttagcaatgcagctcacgtattttcagaaggcc
aaaagactgcatggccaaagatgtctgtatgcaatacttttagtagacagctgtatatta
ttgtggctgtattcttcctgttctcagtcacaatgttag
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