Cygnus atratus (black swan): 118244723
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Entry
118244723 CDS
T09349
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1 isoform X1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
118244723 (LGI1)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRRCT
LRR_14
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
118244723
NCBI-ProteinID:
XP_035395762
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Position
7:17160404..17191536
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AA seq
543 aa
AA seq
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MGNASRPFRRIAYFLCLLSVLLLTEGKKPVKPKCPAWCTCTKDNALCENARSIPRSVPPD
VISLSFVRSAFTKIPEGSFLLTPSLQLLLFTSNTFDVISDDAFMGLPHLEYLFIENNSIK
SISRNTFRGLKSLIHLSLANNNLQSLPKDIFKGLDSLTNVDLRGNAFNCDCKLKWLVEWL
GSTNATVEDIYCESPPEYKKRKINSLSPKEFDCIITEFEVYQSLPYQSLSVDTFSYMNDE
HVVIAQPFTGKCIFLEWDHVEVMFRNYDNITGTSTVVCKPIVIESQLYVIVAQLFGGSHI
YKRDIFANKFIKIQDIEILKIRKPNDIETFRIAEDWYFVVADSSKAGFTTVYKWNGNGFY
SHQSLHAWYRDTDVEYLEISGKPHLILSSSSQRPVIYQWNKGTNEFVKRFDIQDMEDAYA
VKHFKVKEDVYICLTRFIGDSKVMKWGGSAFLDLQRMPSRGSMVFQPLQISNYQYAILGS
DYSFTQVYYWDAEKAKFVKFQELNIQAPRSFIHVSIDKRDFLFASSFKGTTLIYKHVIVD
LSA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgccagcagaccctttagaagaattgcttatttcttatgccttttatctgtg
cttttgctgactgaagggaagaaaccagtgaagccaaaatgtcctgcctggtgtacttgt
accaaagataatgctttatgtgaaaatgccagatctattcctcgcagcgttccgcctgat
gttatctcactatcctttgtgagatctgcttttactaaaatcccagaagggagttttttg
ctcacaccatctctgcagcttctgttgtttacctccaacacttttgatgttattagtgat
gacgctttcatgggccttcctcatctagaatatttgttcatagagaacaacagcattaag
tcaatttcaagaaatactttcagaggactgaaatctttaattcacctgagtctcgcaaat
aataatctccaatcgcttccaaaagacatattcaaaggcttggattctttaacaaatgta
gatcttagaggcaatgcatttaattgtgactgcaaactgaagtggttagtggagtggctg
ggcagcaccaatgcaactgttgaagacatttactgtgaaagcccaccagaatataagaag
cgcaaaatcaatagcctctcaccgaaagaatttgattgtattattacagaatttgaagtt
tatcagtccctgccataccaatctctgtcagtagatactttctcatacatgaatgatgaa
catgtggttattgctcagcccttcaccggaaaatgcatctttctcgaatgggaccacgta
gaagtgatgttcaggaattatgacaacataacaggtacttcaactgttgtgtgtaaaccc
atagttattgagagtcagctatatgtcattgtcgcacagctgtttggaggctcccacata
tataaaagagatatttttgctaataagtttataaaaattcaagatattgaaatccttaaa
atacgaaaacccaatgacattgaaactttcaggattgctgaagactggtattttgttgtt
gcagacagttcaaaagctggtttcaccactgtttacaaatggaatgggaatggattttat
tcccatcagtctctgcacgcctggtacagagatactgatgtggagtatcttgaaatatcc
ggcaaaccacatttaattctgtcaagtagttcccaaagacctgtaatatatcagtggaac
aaaggaacaaatgaatttgttaagcgttttgatatccaagatatggaagatgcatatgca
gtgaaacatttcaaggtgaaagaggatgtatacatttgtttaacaagatttattggggac
tctaaagtaatgaaatggggtggttcagcatttctggatttacaaaggatgccatcccga
gggtcaatggtattccaaccgcttcagataagtaattatcaatatgccattcttggaagt
gattattctttcactcaagtctattattgggatgctgagaaagcaaaatttgtgaagttt
caagaattaaacatacaggcaccaagatctttcatacatgtctccatcgataaacgagat
tttctctttgcttcaagttttaagggaactacattgatttataaacatgtcatagttgac
ttaagcgcatga
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