Cygnus atratus (black swan): 118245393
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Entry
118245393 CDS
T09349
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cata01009
]
118245393 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118245393 (TRPC5)
Protein phosphatases and associated proteins [BR:
cata01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118245393 (TRPC5)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118245393 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
118245393
NCBI-ProteinID:
XP_035397458
LinkDB
All DBs
Position
13:complement(3568907..3633107)
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AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSVEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWLILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSFWYLCKWIHNQLCPGNDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDETNEDSAGEKSKAKSVSFNVANKKKDFNVSALIKTMSGIDMVEEKPKSNGISKRSFI
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEANSEPMYTISDGIIQPHYMWKDIKYSQ
IDKEREENCSKSEINLNEVDYSGNTRLTGQSKECPVVCTSSLHCASSICSSNSKLLDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtaaactattcaccatacagagatcggatcccactg
cagatcgtgcgagcagaggcagagctctcggtggaagagaaggcctacctcagcgccgtg
gagaagggggactatgccagtgtgaaacatgccttacaagaggcggagatctactacaac
atcaacattaactgtatggatcctctcggtcgcagtgcccttttaatagccatagagaac
gaaaatctggagatcatggagttacttctgagccacagcgtgtacgtgggagacgctctg
ctgtacgcgatacggaaagaggtggtgggagctgtggagctgctgctgaattacaggaag
ccaagtggagaaaagcaggttccaaccttgatgatggacacccagttttcagaattcact
ccagatatcaccccaataatgctggcggctcacaccaacaactatgaaatcatcaaactg
cttgtccaaagacgggtaacgattccacgcccacaccagatcagatgcaactgcgtggaa
tgtgtctccagttcggaggtggacagcctgaggcattccaggtcaaggctgaacatctac
aaagccttagccagcccttcgctgattgccttatcgagcgaggacccgatcctgacggct
ttccgactgggctgggagctgaaggagctcagcaaagtggaaaatgagttcaaggctgaa
tatgaagagctttcccagcagtgcaagcgttttgctaaggaccttttggaccaagcacgg
agttcccgagaactggagatcattctcaatcacagagatgatcagagtgaagagttggac
ccccaaaaatgtcatgatttggcaaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccaaactgccagcagctactagcaacgctttggtacgacggttttcca
ggatggaggcggaaacactgggcagtaaaactcttgacctgtgtcaccatcggactgctg
ttccctgtgctatctgtggcatacctgattgcaccgaagagcaggctgggactgttcatt
aaaaagccatttatcaagtttatctgccacactggctcgtacctaaccttcctcttcatg
ctcctgctggcatcgcagcacatcgtcaggaccgaccttcacatgcagggcccgcctccc
accattgtggagtggctgatcctgccctgggttctaggttttatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtacgtacatgactggtggaatctgatggacttt
gcaatgaactccctctaccttgcaactatctcccttaaaattgttgcctatgtcaagtat
aacggttctcgtccaagggaggaatgggaaatgtggcacccgactctcatcgcagaagcc
ctctttgcaatatccaatattttaagttccttgcgtctcatatccctgtttacagcaaat
tcacacctgggacccttgcagatttctctgggacgcatgctgctagacatccttaaattc
ctttttatctactgtctggtgcttctggctttcgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacactttttgagaccctccagtcgctcttctggtctgtgttc
ggtctgctgaatctctatgtcaccaatgtgaaagccagacatgagttcacagaattcgtt
ggagccactatgtttggaacctacaacgtcatctctctcgtcgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccatgcagacatagagtggaag
tttgcacggacaaagctctggatgagttactttgatgaaggtgccactctgccccctcct
tttaacatcatcccaagtcccaagtctttctggtacctttgcaagtggattcacaatcag
ctgtgcccaggcaatgactctgacaatgaacagaagaggcatgaaaacctcaaaacattc
acagaaaggcatgctgacaacctcattcagaatcaacattaccaggaagtgatcagaaat
cttgtgaaaagatacgttgcagcaatgatcagaacttccaaaaccaatgaaggtttaact
gaagaaaatttcaaggaattaaaacaggacatctcaagttttcgctacgaagtccttgat
ctcctgggaaacaggaagccccagaggagaagttactctaccagcagcacagaggtgtcc
caaaaggatgaaacaaacgaggacagtgctggggaaaaatccaaagccaagagtgtgtct
ttcaatgtagccaacaaaaagaaggacttcaatgtatctgctctaattaaaaccatgtct
gggattgatatggtggaagagaagccaaaaagcaatgggatcagtaagcgctccttcatc
cgaaatggaaatagagttcagaggctttccagctccaagaaggagtcctttaagagactg
ggcctgctgttctccaaaatgaacgggcacgtccctgaagcaaattcagagcccatgtac
actatttcagatggaattattcagccacactacatgtggaaagacattaaatattctcag
attgataaagagagagaagagaattgttccaaaagtgaaattaacctcaatgaggtggac
tacagtgggaacacgagacttacaggacagagcaaggagtgccctgtggtttgtaccagc
tcccttcactgtgcttccagtatttgttcctctaactccaaacttttagactcatcagag
gatgtgtttgattcatggggagaggcttgtgacttgtttataaaccagtggaaagacggg
caggaggatcatgtaacaactcggctataa
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