Cygnus atratus (black swan): 118245452
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Entry
118245452 CDS
T09349
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
cata04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118245452
04020 Calcium signaling pathway
118245452
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118245452
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118245452
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118245452
Protein kinases [BR:
cata01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
118245452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
ig
Pkinase
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
VEGFR-2_TMD
Ig_VEGFR-1-like_5th
Ig_4
Ig_6
Ig_5
C2-set_2
C2-set
C1-set
C2-set_3
V-set_CD47
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
118245452
NCBI-ProteinID:
XP_035397538
LinkDB
All DBs
Position
13:complement(4756836..4887837)
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AA seq
1316 aa
AA seq
DB search
MAPRPSAATAACALLLLLTPGLAEDEFFEKPTLSIAKDHIVILPGEALKIKCRGAPSVSW
LLREDQREDPRVHLSSCRNNTRQSCSMLVIRKVTANDTGYFTCIHDDSPSNEDLMAKIYV
FVKDYRNPFVEIHPEHPQIIYILDETKTVVVPCRVTSPDIKPKLTQYPSSVEMNFKRSVW
DPRRGFVIPSHAFVYSGLLTCTANVNGSVFTSYYLAQRLEGRVQNLALKATPKKLLVGET
LYLECRAETFINGRIELIWTCPNGRHPYPRRKIDQSGTVYKVGSILTIENVTMQDGGMYT
CKTFNVTRLEANVTVTVYDKPFITVSHKKGPYYEITSGHKSLKLAAKVDAFPRPTVTWYK
DGKLIKDNHTCYEPDPLKYRLGIRDVRPKHAGNYTIVLSNAKYGLYKNLTMQLVVTERPK
IYEKETDFDKIERVELRSKHKIQCTVSGNPDPKIEWKWQPCSLTDTLCNPDGEKILVQEN
MIIGNKIKSIENMTMKHGDKRKIVSTLTMENSSASGIYYCVASNKIGEEERSIEFYVSDV
PFGLQTDPQVTTIMGNDVQLTCRASKYIYSNLAWYYPSSEAAPGDSVIKKTDNYSISLTL
VIANVTKEHGGLYKCRAQNQHNSTDTLEQHTQLLVRAKAAPYVIQNLTDLEVNISGKIIL
ECKVSGTPEPHITWRKNGHPISAASGISMENNTLVIERVKKDDEGLYECKASNDMGQDST
SAFIKIQGSEEKSNIEVIILVCTGLAATLFWLLLTLFIRKLRKPDATDIKTGYLSIIMDP
EEMPLDEQCDRLPYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKSSTCKTVAVK
MLKAECATTNECKALMSELKILIHIGHHLNVVNLLGACTKAGGPLMVIVEYCKYGNLSNY
LRGKRGDFIAYKSQENSDQAEKSLDESNSDLTELIKRRLESVASTGSSASSGFIEDKSYS
DSEEDEEDAEDLYKRPLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVK
ICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLLWEIFSLGA
SPYPGVQIDEDFCRRLKEGTRMRSPEYSTPEVYQTMLDCWHGVPTERPTFTELVERLGDL
LQANVQQDGKDYIPLNITLCPDGESNSKTCPMEENLNNCVNRWSAVETGNNSKKRPLSVK
TFDEVPVEKEKVIHEESDSGMVLTSDEIKSPKRLEIRSWPYGIMALARRAVSKSKESILS
DHEREAVKYQPAVQVEEDTMDFTLEDSVLLPMDPNLECHSPPPDYNSVIHYSAPPV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggccccccggcccagcgccgccacggccgcctgcgccctgctgctgctgctgacgccc
ggtcttgctgaggacgaattttttgagaaaccgacgctaagcattgcaaaagaccacatt
gtcatcttaccaggagaagccctaaaaataaaatgcaggggagcaccttcggtgagctgg
cttttgagggaggaccagagggaagaccccagggtgcacctcagcagctgccgaaataac
acgcggcagagctgcagcatgctcgtcatcaggaaagtcacagccaacgacaccggttac
ttcacttgcatccatgacgactccccatccaacgaggatctcatggccaagatttacgtc
tttgttaaagactacagaaatccgtttgtggagattcacccggaacatccccagatcatc
tacattttagatgagacgaaaacggttgttgtcccctgccgagttacttctccagatatc
aaacccaagcttacccagtatcccagttctgtagagatgaacttcaagaggagtgtgtgg
gacccaagaagaggatttgtcatcccctctcatgcttttgtttattctggattactcaca
tgcactgcaaatgtcaatggaagcgtgttcacatcctattacctagcacagaggttggag
ggcagagtacagaacctagctctgaaagcaactcccaaaaaactgctggttggagaaact
ctctatttggaatgcagagcagaaaccttcatcaatgggcgcatcgaactcatatggacg
tgtccgaacgggcgacacccttatcctagaagaaaaatagaccagagtggaacggtgtat
aaagttggcagcattctgacgattgaaaatgtcaccatgcaagatggaggcatgtataca
tgcaaaacattcaatgtaacgaggctggaggccaatgtcacagtcacagtgtatgacaaa
cccttcattacggtttcacataagaaagggccttactacgagatcacatcaggacacaag
tcactgaaactagctgcaaaggtggacgcctttcctcgcccaactgttacctggtacaaa
gacggcaaactgatcaaggataaccatacttgctatgagcccgacccactgaaatacagg
ctgggcataagagacgtgagaccaaagcatgccgggaactacaccatcgtcttgagcaat
gcaaaatatggcctgtataagaacctcaccatgcagctggttgtgacagagagacccaag
atctacgaaaaggaaactgatttcgataagattgagcgggtagaattaagaagcaaacac
aaaatccagtgcaccgtaagcggaaatcctgacccaaagatcgagtggaagtggcagccc
tgcagcctcacagacaccctgtgcaaccctgatggggaaaaaattctggttcaggagaac
atgatcataggcaacaagatcaagagcattgaaaatatgaccatgaagcacggggataaa
aggaagattgtgagcacgctaactatggaaaacagcagcgcatcggggatctattactgt
gtggcttcaaacaagattggtgaagaagagaggagcattgagttctacgtctcagatgtg
ccatttgggctgcaaacagacccacaggtcacaaccatcatggggaacgatgtccagctg
acctgccgggcctccaagtacatctacagcaacctggcctggtactacccctcctcggag
gcggctcccggtgactcggtgatcaagaaaactgacaactactccatttctttgacgttg
gtcattgctaacgtcacgaaggagcacggtggcctctacaagtgcagagctcagaaccag
cacaacagcacggacacgctggagcagcacactcagctccttgtcagagcaaaggcagcg
ccatatgttatccagaatctgaccgacctggaggttaacatcagcggcaagatcattctg
gagtgcaaagtcagcggaacgccagagcctcacattacctggaggaagaacggccacccc
atttcagcagcctcaggaatttccatggaaaataataccctggtcattgagcgagtgaag
aaggatgatgaagggctctatgaatgcaaggcatccaatgacatgggccaagacagtaca
tcagccttcattaaaatacaaggttctgaagagaaatccaacatcgaagtcatcattttg
gtctgcaccggtctagcagctaccctcttctggcttcttctgaccctcttcattcggaag
ctgagaaaacccgatgccacagacattaaaacaggatacctgtcaattataatggatcca
gaggaaatgcctcttgacgagcaatgtgaccgtcttccctacgacagcagcaaatgggaa
ttcccaagagacagactgcggctgggtaaaacactgggtcacggtgcttttgggaaggtg
gtggaggcgtctgcttttggcattgataaatcttcaacctgcaaaacagttgccgtaaaa
atgcttaaagcagaatgtgcaactactaatgaatgcaaggctttaatgtctgaactgaag
atcctcatacacataggacatcatctgaatgtagtcaacctgctgggagcctgtaccaaa
gctggaggtcctttaatggtcatagtagaatattgcaaatatggaaacctgtccaattac
ctacgaggaaaacgaggagatttcattgcatacaagtcccaggaaaattctgaccaagca
gagaaaagtctggatgagtccaacagtgatttgaccgaactgatcaagagacgccttgag
agcgtagccagcactggaagctctgccagctcaggatttattgaagataagagttatagt
gattctgaagaggatgaagaagatgctgaggatctgtacaagcggcctctgacgttggag
gatctgatatgctacagcttccaagtggcaaaagggatggaatttctcgcctccagaaaa
tgcattcatcgggatttggcagcaaggaacatccttctttcagagaacaacgtggttaag
atctgtgactttggactagccagggatatttacaaagaccctgactatgtacggaaagga
gatgcaagacttccactcaaatggatggctccagaagctatttttgataaaatttacaca
acacagagtgatgtatggtcttttggagtgctgctatgggaaatattttccctaggtgcc
tcaccataccccggagtgcagatagatgaggacttttgccgacgactcaaagaaggaacc
cggatgcgatctccagaatattctactccggaagtctaccagacaatgctggattgttgg
catggagtgcccacagagaggcctactttcacagagcttgtggagcgtttaggagatctt
cttcaggccaatgtacagcaggatggtaaagactatatcccactgaacatcacgttgtgc
cccgatggagagtctaactccaaaacttgccccatggaagaaaatttgaacaactgtgtc
aatcgctggagcgcagtggaaactggtaacaacagcaagaagcgaccactgagtgtgaag
acatttgatgaggtgccagtggaaaaggagaaagtgatacatgaggagtcagacagtggg
atggtgctgacgtcagatgagataaaaagcccaaagaggctggaaatccgttcctggcct
tatgggatcatggcgctagcgcggagagctgttagcaagagcaaagaatccatattatct
gaccacgagcgtgaggctgtcaaataccagccagcagtgcaggttgaagaggacaccatg
gacttcacactggaagactctgttctccttcctatggatcccaacctggagtgccacagc
ccacctccagattacaactccgtcattcactactctgcacctccagtgtaa
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