Cygnus atratus (black swan): 118245887
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Entry
118245887 CDS
T09349
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118245887 (TRPC6)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118245887 (TRPC6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
118245887
NCBI-ProteinID:
XP_035398356
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Position
1:194659550..194755288
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AA seq
895 aa
AA seq
DB search
MSQAQPYAPRKGGSPGTGARRNDSQDYLLLDAEPGDDSALPPYAFYPLRGNENRLALRRQ
TILREKGRRQASRGPAYMFNDRSTSLSLEEERFLDAAEYGNIPVIRKMLEECPSLNVNCV
DYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEG
KRLALSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPH
DYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLAN
IEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMSHNNGEHGRPSLSRLKL
AIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAP
CSKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLRPNETTGNVKQLFRMKTS
CFSWMEMLIISWVIGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFW
HASRAQNLVDANMKDLSSPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIA
YILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTV
EESFKTLFWAIFGLSEVKSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSF
QEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLRIKKWISKPFLCQ
KKNFQEDAEMNKLGQRKQSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKES
DEVNEGELKEIKQDISSLRYELLEEKSQNSEDLAELIRKLGEKLSINSKEEENKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggctcagccttacgccccgaggaagggcggctcgccggggaccggcgcccgg
cggaacgacagccaggactacctgctgctggacgcggagccgggcgacgacagcgccctg
ccgccctacgccttctacccgctcagaggcaatgagaatagactagcgctacgacgacaa
accattctccgggagaaggggaggaggcaggccagtcgagggccagcgtatatgtttaat
gaccgctcaacaagtctttctcttgaggaggagcgctttttggatgcagcagaatatgga
aatatcccggtgattcgcaaaatgctggaagaatgcccctcactcaatgtgaattgtgtg
gactatatggggcagaatgccttgcagctagcagttgccaatgagcacctggagatcaca
gaacttctactgaagaaggagaacctgtctcgggttggggatgccttgcttttggctatt
agcaaaggttacgttcggatagtggaagccatcctaaaccatcccgcatttgccgaaggc
aagaggcttgcattaagtccaagccagtcggagctccagcacgatgacttctatgcatac
gatgaagatggaacacgtttttcccatgatgttacaccaatcatcctggctgctcactgc
cacgaatatgagatcgtccacactcttttgagaaaaggggctcggatcgataggccacat
gactatttctgtaagtgcagtgaatgcaatcagaaacaaaagcatgactctttcagccat
tctcggtccagaatcaatgcctacaaaggtctggccagccctgcttatctgtctttatcc
agtgaagaccctgtaatgactgccttagagctcagtaatgaactggctgtgctagccaat
attgaaaaagagtttaagaatgattacaagaaattgtctatgcaatgcaaagattttgta
gttggactccttgatttgtgcagaaatacagaagaagtggaagctattttgaatggtgat
gtagagatgagccataataatggagaacatggtcgccccagccttagccgcttaaaactt
gccattaagtatgaagtaaaaaaatttgtagcacatccaaactgccagcaacaacttctc
tcaatctggtatgaaaatttatcaggtttgcggcagcagaccatggcagtgaagtttcta
gttgttctcgccgttgcagtaggactgcccttcctttcaatggcttactggattgctcct
tgcagtaagctggggaggataatgcgtggaccatttatgaagttcgtagcccatgcagct
tctttcaccatttttcttggtctgcttgtaatgaatgcagctgacagatttgatggcacc
aaactccgacctaatgaaacaacaggcaatgtcaaacagctatttaggatgaaaacatcc
tgtttctcatggatggaaatgctcattatttcttgggtaataggcatgatatggtctgaa
tgtaaagaaatttggtctcaaggtccaaaggaatacctttttgaattatggaatatgctt
gattttggcatgttagcaatttttgcagcatcattcatagcaaggtttatggcattttgg
catgcgtccagagcccagaacttggttgatgcaaatatgaaagacctgtcaagtccaaca
ctggagcccaacataaaatactacaccttggctagaataaactgggatccgtctgatcca
cagatcatatctgaaggcctgtatgctattgcagtagtattaagtttctccagaatagcc
tacatcttaccagccaatgaaagctttgggccactgcagatatcacttggcagaactgtg
aaagacatcttcaagttcatggtgatatttatcatggtgtttgtagctttcatgataggc
atgtttaatctctattcctactatctgggggcaaaacaaaatgaagcattcacaactgtt
gaagaaagtttcaagacattattctgggctatatttggactctcagaagttaaatcagtt
gtcatcaattataaacacaaattcattgaaaatattggctatgtcctttatggagtctat
aatgttaccatggtcattgtcttactgaacatgcttattgcaatgatcaacagctcattc
caggaaattgaggatgatgctgatgtagaatggaagtttgcaagggctaaactttggttt
tcttactttgaagaagggaggactcttccagtacccttcaacttagtgccaagtccaaaa
tctttgctgtatctcttactcagaatcaaaaaatggatttctaaaccatttctgtgccaa
aagaaaaactttcaggaagatgcagagatgaataagcttggtcaaaggaagcaatcaagt
ataagaagctctgatgaaatccacttaaatagtttaaacaatcctccaagacaataccag
aaaataatgaagcgtttgattaaaagatatgtactgaaagctcagatagataaggaaagt
gatgaagtcaatgaaggtgaactgaaggagattaaacaggacatttcaagtctccggtat
gaactccttgaggaaaaatctcaaaattcagaagatctggcagaacttataaggaaactt
ggggaaaaattgtcaatcaattctaaggaagaagaaaacaaaagataa
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