Cygnus atratus (black swan): 118247571
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Entry
118247571 CDS
T09349
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00260
Glycine, serine and threonine metabolism
cata00270
Cysteine and methionine metabolism
cata00670
One carbon pool by folate
cata01100
Metabolic pathways
cata01230
Biosynthesis of amino acids
Module
cata_M00035
Methionine degradation
cata_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118247571
00270 Cysteine and methionine metabolism
118247571
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118247571
Enzymes [BR:
cata01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
118247571
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-GeneID:
118247571
NCBI-ProteinID:
XP_035401539
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Position
1:complement(115795715..115825676)
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AA seq
567 aa
AA seq
DB search
MEKLMSERPIPMSKDEMPSLPTQLKPDANSCPHAPGKYFLSGGTDQEDCKANDKERKWIR
PDTPSKCTWKLGKPISASPHRHVTLPEPPNILPNILNKVGNTPLVRINKIGKHFGLKCEL
LVKCEYFNAGGSVKDRISLRMVEDAEKAGILKPGDTIIEPTSGNTGIGLALAAAVKGYRC
IIVMPEKMSMEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNAHILDQYRN
ASNPLTHYDTTAEEILQQCEGKIDMLVATAGTGGTITGISRKLKEKCPGCKIIGADPEGS
ILAQPEELNKTDKTTYEVEGIGYDFVPTVLDRSTVDQWYKISDEESFALARMLIREEGLL
CGGSSGSAMSAAVKAAKELKEGQRCVVILPDSIRNYMSKFLSDKWMIQKGFMKEEDLVKK
PWWWNISVQELSLSAPLTVLPTVTCAKTIEILREKGFDQVPVVDESGVILGMVTLGNMLS
LLLAGKVQPSDEVSKVIYKQFKQINLKDNLGKLSHILEIDHFALVVHEQIQYHTDGSSSK
RQMVFGIVTAIDLLNFVTARERERKSN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactgatgtcagagagacctattccaatgtctaaggatgaaatgccttcactt
cctacccagctcaagccagacgcaaactcatgccctcatgctcctggcaaatacttcctt
tctggagggacagaccaagaggactgtaaggctaacgataaggagaggaagtggatccgt
cctgatacacctagcaaatgcacgtggaagctcgggaaacccatctctgcctccccccat
cgtcatgtcactctgccagagcctccaaacatcctgccgaacatcctgaataaagttggc
aatacacctttggtgcgaatcaacaagattgggaagcacttcggcctaaagtgtgaactc
ttggtaaaatgcgagtacttcaatgccgggggcagcgtgaaggaccgcatcagcctgagg
atggtggaggatgctgagaaagctgggatcttgaagcctggagacacaatcatagagcca
acctctggaaacacaggaattgggctggccttggctgcagccgtgaagggttaccgctgt
atcattgtgatgccagagaaaatgagtatggagaaggtggatgttctgagggctttgggt
gctgagattgtgagaaccccgactactgccagatttgattctcctgaatctcacgtggga
gtagcgtggagactgaaaaatgaaatccccaatgcacatatcctagatcagtaccgcaat
gccagcaaccccctgacacactacgacaccacagctgaggagatcctgcagcagtgcgaa
ggaaaaatagacatgctggtggctacagctggcacaggaggtaccatcactggcatttcc
agaaagctgaaggagaagtgtccaggttgcaaaatcataggtgctgatcctgaaggttcc
atccttgctcaaccagaagaattgaacaagactgacaagacgacgtatgaagtggaggga
atcggatatgatttcgtccccacggtgctggatagatctacagtggaccagtggtacaag
atcagcgatgaggagtcgtttgcgttagcacgcatgctaatccgagaggaaggactgctg
tgtggtggcagctcaggcagtgcaatgtctgcagctgtgaaggcagccaaagagctgaag
gaaggtcagcgctgtgttgttatcctccctgactctatcaggaactacatgtccaagttc
ttgagtgacaaatggatgattcagaaagggttcatgaaagaagaagaccttgtcaaaaaa
ccttggtggtggaacatcagtgttcaggagttaagcctctcagctcccctgactgtgctt
ccaactgttacttgtgcaaagactattgaaattctccgagagaagggattcgaccaggta
ccagttgttgatgaatctggggtgattttgggcatggttaccctaggtaacatgctttct
ttgctgcttgctggaaaagttcagccttcagatgaagtcagcaaagtaatctacaagcaa
ttcaaacagattaacctgaaagacaacttgggaaagctctctcatatcctggagatagac
cactttgctctagtggtccatgaacaaattcagtatcacaccgatggctcctccagtaag
cgacaaatggtgtttggcattgttacagccatcgacctgctcaactttgtaaccgcgaga
gaacgggaaagaaagtccaactaa
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