Cygnus atratus (black swan): 118247575
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Entry
118247575 CDS
T09349
Symbol
CD4
Name
(RefSeq) LOW QUALITY PROTEIN: T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03250
Viral life cycle - HIV-1
cata03260
Virion - Human immunodeficiency virus
cata04060
Cytokine-cytokine receptor interaction
cata04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118247575 (CD4)
03260 Virion - Human immunodeficiency virus
118247575 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118247575 (CD4)
04514 Cell adhesion molecules
118247575 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cata04090
]
118247575 (CD4)
CD molecules [BR:
cata04090
]
Proteins
118247575 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
Tcell_CD4_C
ig
I-set
Ig_2
Ig_6
Izumo-Ig
LapA_dom
CD4-extracel
Egh16-like
Receptor_2B4
Microp_apicomplexa_22
BAMBI_C
Motif
Other DBs
NCBI-GeneID:
118247575
NCBI-ProteinID:
XP_035401562
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All DBs
Position
1:100543189..100548358
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AA seq
474 aa
AA seq
DB search
MELCGTAVLQLGAVFMVLQLGLTHIMAHQQQIGVEGKDVILNCKRHDKDVTWKYKNDAVS
PTTIIQLSTRKIFKGRAPMSDRSEINQNSKHLKVSNLRISDAGTYICECGSDSNSISLHV
VKLTISSNGHFLPDDDLELTFMHNSHNSQPRFSITLFNSHNSIVTPDILQNEAPRKYVLK
LKQLKTTDSGTWMCNMHSDSPSISQNISFNVKVLGFENTHLERMYAAADSTVTLSWHLNF
QKIGWKKFFTGQVVWTQSKAITLLDFNATADGQLHETKQSNQALFEIPEMQRDSTVKVKL
PKIQLRHSGEYMCQLLYNRRYIQSKTELVVMQVSANPPGPLPKGAEMTLLCQVSGPIPSN
VHLLWERVNGTQMDIKKSKQSETQVEVKVTAAGCGTVTLTEDNNMKLSLNYTVAPVWISY
TVIGVTIGAGVLMYVLVCLGIMVGMSWQRRRQRAKRMARARQHLLEKKTCQCQQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtgtggtacagcagttctgcagctgggtgctgtcttcatggttctgcagctg
ggtctgacccacattatggctcatcaacaacagattggggttgagggaaaggatgtgatc
ctgaactgtaaaaggcatgacaaagatgtgacctggaagtacaagaatgatgcagtatct
cctactactattatacagctctcaactaggaagatatttaaaggcagagctccaatgtca
gatcggtctgaaataaaccagaacagtaaacatctgaaggtgtcaaacttgaggatctct
gatgctggcacctacatctgtgaatgtggctctgacagtaacagcatctcactacatgtc
gttaaattgacaatctcttcaaatgggcacttcctgccagatgatgacctcgagctgact
ttcatgcacaactcacacaattctcaaccccgttttagcatcacattgtttaacagtcac
aacagcatagtgacaccagacatcttgcaaaatgaggcccctcgaaaatatgtactgaag
ctaaagcaactgaagactacggacagcgggacctggatgtgtaacatgcattcagactct
ccatcgattagtcagaacatctcctttaatgtgaaggtattaggatttgagaatacacac
ttggaaagaatgtatgcagctgctgacagcaccgtgaccttgtcgtggcatctgaacttc
cagaagatagggtggaaaaaatttttcacaggacaagtggtttggacacagagtaaagca
atcactctacttgatttcaacgccacagcagatggacagctgcatgaaactaaacaaagt
aaccaggctttgtttgaaatacctgaaatgcaacgtgacagtaccgtaaaagtgaaactc
cccaaaatccagttgaggcactctggagagtacatgtgccagctgctgtacaacagaaga
tacatacaaagcaagacagagctggtggtgatgcaagtgtctgccaaccctcctgggcca
ctccctaaaggggctgagatgacactgctctgccaggtgtccggccccatcccatctaat
gtccacttgctctgggaacgtgttaatgggactcagatggacatcaagaagtcaaaacag
agtgaaacacaggtggaggtgaaggtcactgctgcagggtgtggaactgtcaccttgacg
gaagacaataacatgaaactcagccttaattacaccgtggctcctgtttggattagctat
acagtaattggagtgactattggagctggtgtgttgatgtatgtccttgtatgcctgggc
ataatggttggtatgagctggcagcggagaaggcaacgagcaaaaaggatggcacgagca
agacagcacttgctggaaaagaagacatgtcaatgtcaacagtaa
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