Cygnus atratus (black swan): 118249275
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Entry
118249275 CDS
T09349
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00514
Other types of O-glycan biosynthesis
cata04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118249275 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118249275 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cata01003
]
118249275 (LFNG)
Enzymes [BR:
cata01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
118249275 (LFNG)
Glycosyltransferases [BR:
cata01003
]
Glycan extension
O-Glycan
118249275 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
118249275
NCBI-ProteinID:
XP_035404925
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All DBs
Position
15:complement(5046884..5058491)
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AA seq
363 aa
AA seq
DB search
MLKSCGRKLLLSLVGSMFTCLLVLMVEPPGRPGLARGEAGGAQRALQSLGAAGQAAQGSG
GLRSFADYFGRLSRARREVPAAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLELLLDT
WISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESGRKWF
CHVDDDNYVNVRTLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFATGG
AGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLE
NLHQVPKTEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPWCPAN
VVY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcggcaggaagctgctgctgtccctcgtgggctccatgttcacctgc
ctcctggtgctcatggtggagcctccggggaggccggggctggcgaggggagaggccggc
ggggcgcagcgggcgctgcagagcctgggggcggcggggcaggcggcgcagggctccggc
ggcctccgcagcttcgccgattatttcgggaggctgagccgagcccgccgggaggtgccc
gccgcccccccgagccccccccggccgcccgccgaggacatttccccccgcgacgtcttc
atcgccgtcaagaccaccaaaaagttccacaaggcgcgcctggagctgctgctcgacacc
tggatctcccgcaatcgcgacatgaccttcatcttcacagacggggaggatgaagagctg
aagaagcaagcacgaaacgtcatcaacaccaactgctcggccgcccacagccgccaggcc
ctgtcttgcaagatggctgtggagtacgacaagttcatcgagtccgggagaaagtggttc
tgccacgtggacgacgacaactatgtgaacgtgcggacgctggtgaagctgctctccagc
tacccccacacgcaggacatctacatcgggaagcccagcctggaccggcccatccaggcc
acggagaggatcagcgagaacaagatgcaccctgtgcatttctggtttgccacgggagga
gcagggttttgcatcagccgggggctggcgctgaagatgagcccatgggccagcgggggc
cacttcatgagcacggcggagaagatccgcctgcccgatgactgcaccattggctacatc
attgagtccgtgctgggcgtcaagctcatccggagcaacctcttccactcgcatctggag
aacctccaccaggtgcccaagacggagatccacaaacaggtgacactaagctacggcatg
ttcgaaaacaaacgcaactccatccacatgaagggagccttctccgtcgaggaggaccca
tccaggttccgctccgtgcactgcctgctgtaccccgacacgccatggtgccctgccaat
gtggtgtactag
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