KEGG   Cygnus atratus (black swan): 118249306
Entry
118249306         CDS       T09349                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04060  Cytokine-cytokine receptor interaction
cata04672  Intestinal immune network for IgA production
cata04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cata00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    118249306 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118249306 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118249306 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cata04052]
    118249306 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:cata00536]
    118249306 (CXCL12)
Cytokines and neuropeptides [BR:cata04052]
 Cytokines
  Chemokines
   118249306 (CXCL12)
Glycosaminoglycan binding proteins [BR:cata00536]
 Heparan sulfate / Heparin
  Chemokines
   118249306 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 118249306
NCBI-ProteinID: XP_035405032
LinkDB
Position
7:18466747..18483966
AA seq 131 aa
MELRALALLAFALALVSLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq 396 nt   +upstreamnt  +downstreamnt
atggagctccgcgccctcgccctgctcgccttcgccctggccctcgtctccctctcggag
gagaaacccgtcagcctgacttaccgatgtccctgtcgattctacgagagcaacgtggca
agagccaacattaagcacctcaaaatcctctccacccccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagctaaagtggatccag
gaatatctggagaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa

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