Cygnus atratus (black swan): 118249509
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Entry
118249509 CDS
T09349
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04260
Cardiac muscle contraction
cata04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118249509 (CACNA2D1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118249509 (CACNA2D1)
04261 Adrenergic signaling in cardiomyocytes
118249509 (CACNA2D1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118249509 (CACNA2D1)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118249509 (CACNA2D1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_1
DUF3983
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
118249509
NCBI-ProteinID:
XP_035405440
LinkDB
All DBs
Position
1:10292729..10697575
Genome browser
AA seq
1082 aa
AA seq
DB search
MAAGWLLVFSLTLFQSLVMNHSSEGPFPSPTTIKSWVDKMQEDLVTLARTASGVDQLAAI
YLKYRDLYTVEANNPRQLVEIAARDIEKLLSNRSKALVRLAKEAEKYQASHQWRDEFGNN
DIIYYNAKDDQNDPEKNDTESGSQRIRPVFEEDPVFRRQTSYQHAAVHIPTDIYEGSTIV
LNELNWTAALDDVFKRNREEDPTLLWQVFGSATGLARYYPASPWVDKSRTPNKIDLYDVR
RRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVIEMLETLSDDDFVNVVSFNNNAQ
NVSCFNHLVQANVRNKKKLKEAVYKISAKGITDYKKGFSYAFEQLLNHSVSRANCNKIIM
LFTDGGEERAQEIFHKYNEDKKVRVFTFSVGQHNYDKGPIQWMACENKGYYYEIPSIGAI
RINTQEYLDVLGRPMVLAGEKAKQVQWTNVYLDALELGLVITGTLPVFNLTKEQNGKINQ
LILGVMGVDVSLEDIKKLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKNPKSQEPVTLDF
LDAELENDIKVEIRKKMIDGESGEKTFETLVKSQDERYIDKGNRTYTWTAVNGTDYSLAL
VLPSYSFYYIKAKIDEPLIQARYSETLKLDHFDEVGYTFLAPREYCSDVKKSENNTEFLL
NFNEFIDRNTPNSPSCNTDMVIRVLLDAGFTTELAQNYWSKLYLDGVAAQFVVTDGGITR
VFPKRAGEDWLENAETYEVSFYKRSLDNDNYIFTAPYYNKSGANSYETGIMVSKAVEITI
NGKLLKPAVVGIKIDATRWMENFTKTTIKSLCNSEICGCERNSMHVDCVILDDGGFLLMS
NRDEYTQQIGRFFGEIDPGLMRNLINMSLYAFNKSYDYQSVCDPEEEPKQGAGIRSAYVP
TITDILHLGWWASAAAWSILQQLFLSLTFPRFLEAADMEDDDFSAALPKTSCITEQTQYF
FENDDKSFIGIVDCINCSRLYHAEKISNTNLVFIISDSQLLCRSCDPKPLMQAEKPDEGP
NPCEMVKQPRYRKGPDVCFDEAKQEDSADCGGVSGLSPSLWSMVGIQLVLLWLSSGSRHC
QL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggctggctgctggtctttagcctgacacttttccagtccctggtgatgaac
cactcctcggagggacccttcccttcgcccaccacgataaaatcatgggtagataagatg
caagaagacctcgtaactttggcacgaactgcaagtggagtggaccagcttgctgcgata
tatttgaaatacagagatttgtatactgtagaagccaacaaccctcgtcagctagtggaa
attgcagccagagacattgaaaaactactgagtaacaggtccaaggccttggtgcgcctc
gctaaagaagcagagaagtatcaagcatctcatcagtggagggatgagtttgggaataat
gatataatctattacaatgcaaaagatgatcagaatgatcctgaaaagaatgacactgaa
tctggcagccagagaatcagaccagtatttgaagaagatcctgttttccgacggcaaacg
tcttaccaacatgcagcagtccacataccaacagatatttatgaaggctcaacaatcgtg
ttaaatgaactcaactggactgctgcgttggatgatgtgttcaagcggaacagggaagaa
gaccccactttactatggcaggtctttggtagtgcaactggcctcgctaggtattaccca
gcttccccatgggtagataaaagtcgaactccaaacaaaatagatctgtatgatgttcgc
agaagaccatggtatatccaaggagctgcatctcccaaagatatgcttattttagttgat
gcgagtggaagtgtcagtggattgacattgaagctgatccgcacctcggtcattgagatg
ttagagacgttgtctgacgatgactttgtgaatgtagtttcatttaacaataacgctcag
aacgtcagttgctttaatcatcttgtccaagctaatgtgaggaacaagaagaagctgaaa
gaagctgtctataaaatctctgctaaaggaattactgattacaaaaaaggctttagctat
gcttttgaacagctgctaaaccacagtgtttctagagctaactgcaataaaattattatg
ctgtttacggatggtggtgaagaaagagcacaagagattttccataaatataatgaagac
aaaaaagtacgtgtgttcacattttctgttggtcaacataattatgataaaggacctata
cagtggatggcctgtgaaaataaaggttattattatgaaattccatccattggagccata
agaataaacacacaggaatatctggatgttttgggaagaccaatggttttagctggagag
aaagccaaacaggtccaatggacaaatgtctacctggatgctctggagctgggccttgtg
ataacaggaactctgcctgtcttcaatctaacaaaggaacaaaatgggaaaataaatcag
ctgattcttggagtaatgggggttgatgtctctctggaggacataaaaaaactgacacct
cgctttacgctttgtccaaatggatattattttgcaattgatcctaatgggtatgtgcta
cttcatccaaatctccaaccaaagaatccaaaatcccaggagccagttacgctggatttc
ctagatgctgaattggaaaatgatattaaagttgagattcgaaagaaaatgatagatgga
gaaagtggagaaaaaacatttgaaacactggtcaagtcccaagatgagagatacattgat
aaaggaaacagaacatacacatggactgctgtgaatggcactgattacagtttggcattg
gtgttaccatcatacagcttttattatattaaagccaaaatagatgaaccattaattcaa
gccagatattcagaaacactgaagcttgatcattttgatgaagttggctatactttttta
gcaccaagagaatactgtagtgatgtaaagaaatcagaaaacaacactgaatttttatta
aatttcaatgagtttattgatagaaatactccaaacagtccgtcatgtaatactgatatg
gtcattagagttttgctggatgcaggatttacaactgaacttgcccaaaattattggagt
aagctgtatctggatggagttgctgcacaatttgttgttacagatggtggaattaccaga
gtgtttcccaaaagggcaggagaagattggttggaaaatgctgaaacttacgaagtcagc
ttctataaacgaagtttagataatgacaactacattttcacagctccgtactacaacaaa
agtggtgccaatagctatgaaacaggcattatggtaagcaaggctgtggaaataacaatt
aacgggaaacttctgaaacctgcagttgttggaataaaaattgatgcaaccagatggatg
gaaaatttcacaaaaaccacaatcaagagcctgtgcaacagtgaaatctgtggctgtgaa
agaaacagtatgcatgtggattgtgttatccttgatgacggtggatttcttttgatgtca
aatcgagatgaatatactcaacagattggaagattctttggtgaaattgaccctggcctg
atgcgaaacctaattaatatgtccctctatgcctttaacaagtcgtatgactatcaatcg
gtctgtgatcctgaagaagaaccaaagcaaggagctggaattcgttcagcatatgtgcct
acaataacagatatcttgcatctaggatggtgggcttcggcagctgcctggtctatctta
cagcagctgtttttgagcttgactttcccacgtttccttgaggcagctgatatggaagat
gatgatttctctgctgccctgcctaaaacaagttgtatcactgagcaaactcagtatttc
tttgagaatgatgataaatcttttattggcattgtagactgtataaactgttcaagactt
tatcatgcagagaagatttcaaacaccaacctagtattcattattagtgacagccaactg
ctgtgccgctcctgtgatccaaaaccactgatgcaagcagagaagccggatgaagggcca
aatccttgtgaaatggtcaaacagcctaggtacagaaaaggtcctgatgtctgttttgat
gaagctaaacaggaagattcagccgactgcggtggtgtctctggtctgagtccatcactg
tggtctatggtaggaattcagttggtcctgctttggctgtcatctggcagcagacactgt
cagttatga
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