Cygnus atratus (black swan): 118250240
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Entry
118250240 CDS
T09349
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04620
Toll-like receptor signaling pathway
cata04621
NOD-like receptor signaling pathway
cata04622
RIG-I-like receptor signaling pathway
cata05164
Influenza A
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118250240 (TRAF3)
04621 NOD-like receptor signaling pathway
118250240 (TRAF3)
04622 RIG-I-like receptor signaling pathway
118250240 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118250240 (TRAF3)
05168 Herpes simplex virus 1 infection
118250240 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
Cast
zf-C3HC4
MPS2
ATG16
Sina_ZnF
FliJ
Spc29
Tropomyosin
KxDL
zf-RING_UBOX
DUF1664
SPATA24
BLOC1_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
118250240
NCBI-ProteinID:
XP_035407051
EnsemblRapid:
ENSACYG00000002035
LinkDB
All DBs
Position
5:54647757..54720191
Genome browser
AA seq
567 aa
AA seq
DB search
MDASKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNVLLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELACPRADCKEKILRKDLPDHIEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLNRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagtaagaagacagaacctcctttatctgtagaaatggtacaacaaagggcc
aatcccgatcgcagtccttcagcatcaatttatgttccagagcaaggcggctacaaagag
aaatttgtaaatgctgtggaggataagtataaatgcgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgagacctgcatgaatgtcttgcta
agttcttcgagtccaaaatgtacagcctgtcaagaaagcatagtgaaagacaaggtgttt
aaggataattgttgcaggagagaacttcttgcccttcagatatactgcagaaatgaaaac
aagggctgcaaagaacaactgtctctgggtcaattactgatgcatttgaaaactgattgt
caatttgaagaacttgcatgtcctcgtgctgattgcaaagaaaaaatactaagaaaagat
ttgccagaccacatagagaagacctgtaaataccgggagacaacttgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaagacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacattt
cagggaacaaaccaacaaattaaagcacacgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaggaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagtgtagaatcccttcagaacagagtg
actgagctggaaagtgttgacaaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgaacaggcacgatcagatgctgagtgttcatgatattcggctggctgac
atggacctccgattccaagttctagaaactgccagttacaacggagtacttatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacttgtcactgtttttcgtcataatgcgtggagaa
tatgatgcattgcttccttggccatttaagcagaaagtgactctaatgctaatggatcag
ggaccgtcccgacgccacttaggagatgctttcaagccagatcccaacagcagcagtttc
aagaagccaactggagaaatgaacattgcgtctggctgcccagtctttgtggctcaaact
gttctagagaacggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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