Cygnus atratus (black swan): 118250472
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Entry
118250472 CDS
T09349
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118250472 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cata03310
]
118250472 (NR1H4)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118250472 (NR1H4)
Nuclear receptors [BR:
cata03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
118250472 (NR1H4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118250472
NCBI-ProteinID:
XP_035407542
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Position
1:complement(45515566..45555603)
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AA seq
477 aa
AA seq
DB search
MGSEMNLIGHPQLATADGFSLVEGPHLFGVLSEPMSSPVQEADVSPYTQYNSVPFPQVQP
QISSPPYYSNLGFYPPQHEEWYSPGMYELRRIPSETFYTRETEIMDIPAAKKPRLGHSTG
RVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKC
QECRLRKCKQMGMLAECMYTGLLTEIQCKSKRLRKNVKQPPDQTVNEDNEGHDMKQVTST
TKMYREKVEFTPEQQNLLDYIMDSYSKQQIPQEVSKKLLHEEFSAEGNFLILTEMATSHV
QVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSRKLPTGHTVLLEERIRNS
GISDEFITPMFNFYKSVGELKMTQEEYALLTAIVILSPDRQYIKDRESVERLQEPLLDIL
QKFCKLHHPDNPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgaaatgaatttaataggacatccccagctagctactgcagatggattttct
cttgttgaaggtcctcatttatttggtgtcctttcagagccaatgagttctccagtgcaa
gaggcagatgtttcaccttacacacagtacaacagtgtgccatttccccaagttcagcct
cagatttcatcgccaccttattactccaacctgggcttctaccctccacagcatgaggaa
tggtattcccccgggatgtacgagctccgaagaattccctcagagacattttacacaagg
gagacagagataatggatatccctgcagccaaaaagcctagactgggtcactccacagga
agagtgaaaggagaagagctctgtgtggtctgtggtgacaaagcctctgggtaccactac
aatgctcttacctgtgaaggatgcaaagggttcttcagaagaagcatcacaaaaaatgca
gtatacaagtgtaaaaatggaggcaactgcgagatggacatgtatatgaggagaaaatgc
caggagtgccgtctaaggaaatgcaagcaaatgggaatgttggctgaatgtatgtataca
ggtctgttaacagaaatacaatgcaagtcaaaaaggctacggaaaaatgtgaaacagccc
ccagatcaaacggtcaatgaagataacgaaggacatgacatgaagcaagtgacatctaca
actaaaatgtatagggagaaagtagaatttaccccagaacagcagaaccttcttgattac
atcatggattcatacagtaaacaacaaatacctcaggaggtgtcaaaaaagctattacat
gaggaattcagtgctgaagggaattttctgattttaacagaaatggctaccagtcatgtt
caggttcttgtggaattcactaaaaaactaccaggcttccaaacccttgaccatgaagat
cagattgctttgctgaagggctcagctgtagaagccatgttcctccgttcagctgagatc
ttcagtaggaaacttcctacaggacataccgttcttttagaagaaagaattcgtaacagt
ggtatctcagatgaattcataacccccatgtttaatttttataaaagtgttggagagctg
aagatgacacaggaagaatacgcgctgctcacagcaatagttatcctgtccccagatcga
caatacataaaggacagagagtccgtggaaaggcttcaagaacccctgctggatattctg
caaaagttctgcaaacttcatcacccagacaaccctcaacactttgcatgtcttctgggc
cgcctcacagaattacggacatttaaccatcatcacgcagagatgctgatgtcatggaga
gtgaacgatcacaaattcacgcctcttctctgtgagatctgggatgtgcagtga
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