KEGG   Cygnus atratus (black swan): 118250500
Entry
118250500         CDS       T09349                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03420  Nucleotide excision repair
cata04110  Cell cycle
cata04114  Oocyte meiosis
cata04120  Ubiquitin mediated proteolysis
cata04141  Protein processing in endoplasmic reticulum
cata04310  Wnt signaling pathway
cata04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118250500 (RBX1)
   04120 Ubiquitin mediated proteolysis
    118250500 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118250500 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    118250500 (RBX1)
   04350 TGF-beta signaling pathway
    118250500 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118250500 (RBX1)
   04114 Oocyte meiosis
    118250500 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cata04121]
    118250500 (RBX1)
   03400 DNA repair and recombination proteins [BR:cata03400]
    118250500 (RBX1)
Enzymes [BR:cata01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     118250500 (RBX1)
Ubiquitin system [BR:cata04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   118250500 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     118250500 (RBX1)
   Cul2 complex
     118250500 (RBX1)
   Cul3 complex
     118250500 (RBX1)
   Cul4 complex
     118250500 (RBX1)
   Cul7 complex
     118250500 (RBX1)
   Cul8 complex
     118250500 (RBX1)
   Cul9 complex
     118250500 (RBX1)
DNA repair and recombination proteins [BR:cata03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      118250500 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118250500 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 118250500
NCBI-ProteinID: XP_035407592
LinkDB
Position
1:complement(53685072..53696177)
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggacgtggacacccccagcggcaccaacagcggcgcgggcaagaag
cgcttcgaagtgaagaaatggaatgcagtagctctctgggcatgggacattgtggttgat
aactgtgccatttgcagaaaccatattatggatctatgcatagaatgtcaagcaaaccaa
gcatcagctacctctgaagagtgcacagttgcatggggcgtctgcaatcatgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgtccgctggacaacagggaa
tgggagttccaaaagtacggacactag

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