Cygnus atratus (black swan): 118253146
Help
Entry
118253146 CDS
T09349
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118253146 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118253146 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118253146 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_TEN
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
118253146
NCBI-ProteinID:
XP_035413128
LinkDB
All DBs
Position
3:87175587..87377693
Genome browser
AA seq
1661 aa
AA seq
DB search
MARLGWGFLLCAWALCSPALGAPEKGRLRRIAYVLHPGQAGSSGSRHQRPALLGGRQQQQ
QQQRTFNVQLNARYSGGTGSLERSRRMSKPPVPLRLSPAGPHVPPNPAASFAKPARFSPR
PKAPPSPHANSSSSGAGLPLRQKHQLPGVNVCGGQCCHGWSKATGSQRCIKPNCAPPCQN
GGMCLRPQLCVCKPGTKGNSCEDTVMQDTSSTEGRSPVAPPWPIPQQAAQQTFSRKVQVP
PKVGPMTQMAFTIKQKPPVGLPQQMQPQMIPLSSQTLMMNLHHGQTQEYVIKPKYYPVKK
VISGEQSTEGSLPLRLGQDQLASPFQLGNHTGRIKVVFTPSICKVTCTKGNCQNNCEKGN
TTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQIPVQSAN
TPKLYHHPQQVNKAVGSQVIHSTHTLPLTMSGQQGVKVKFPPNIVNIHVKHPPEASVQIH
QVSRIDSASTGQKTKVPQPGHPQVSYQGLPYQKTQKGHTTYTNQQPIPHVFPVSVKTQLG
RCFQETIGTQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYSPMMECPQGYK
RINATFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFVPDPTLSRCIADSPMVAEEKG
PCYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYTV
SGPHRNKLYHHPAVRVQPPVIGKTPITQPVAKGTSPPPLPAKEEPVEALTFSQKSEPEMA
VQEVATAAPDQELVSLDQEKQILEPGQPQLSPGISTINLHPQFPVVIEKTSPPLPVEVAP
EVSTSSASQVIAPTQVTEINECTVNPDICGAGHCVNLPVGYTCICYEGYKLNDQQTKCSD
INECNQTPHLCSLGRCENTEGSFLCICQAGFMASEDGTDCVDFDECSRPDTCGEGFCINT
VGSYRCEYCDSGYQMNRRGECEDIDECMTPTTCPDAQCINAPGSYQCIPCRVGFRGWNGQ
CHDINECQYGNLCTNGRCENTEGSFRCICGQGFKLSASEDQCEDIDECQHRSLCVNGHCR
NTEGSFRCVCSQGYALSSTGDQCEDIDECLQDSDVCLRGNCMNTDGSYKCTCPDGFQQIA
NRGCQDINECERSDLCSPHGECLNTDGSYQCICEQGFSVSADGRTCEDVDECVNGTLCGS
HGFCENTDGSYRCLCYQGYQDAQDGQGCTDVNECEMLSGVCGEALCENVDGSFLCLCSDE
NQEYDPMTGQCRFRTSPELPIEADQHEDGKKECYYNLNDANFCDNVLTSNVTKQECCCTL
GAGWGDNCEIFPCPVFGTAEFTDLCPEGKGFIPSGESSYGLLAENYKDADECQLFGQEIC
KNGFCLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPNSCIDGQCINTEGSYNCFCTHP
MVLDATEKRCIRPADSSEQTEETEVYQDLCWQHLSDDFVCSRPLVGKQTTYTECCCLYGE
AWGMQCALCPMKESEDYAQLCNIPVPGSRRPYGQDALVDFEEHYTPETNPYFVEDRFLNS
FEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECNELNNRMSLC
KNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNSELDSELE
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggctcggctcggctggggcttcctcctgtgcgcctgggcgctctgctcgccggcgctc
ggcgctccggagaagggcaggctgaggaggatcgcctacgtgctgcaccccggccaggcg
ggctcctcgggcagccggcaccagcgcccggccctgctggggggccggcagcagcaacag
cagcagcagcgcacgtttaacgtccagctcaacgcccggtacagcggcggcaccggcagc
ctggagcgcagccggcggatgagcaagccgcccgtcccgctccgcctgagccccgccgga
ccgcacgtcccccccaaccccgccgcctccttcgccaagccggcccgcttcagcccgcgg
cccaaagctccgccgagcccccacgctaacagcagcagcagcggtgccggcctgccgctc
cgccagaagcaccagctgccgggggtgaacgtgtgcggggggcagtgctgccacggctgg
agcaaggccacgggctcccagaggtgcatcaaacctaactgtgcaccaccatgccaaaat
ggagggatgtgcctgcgacctcagctttgtgtgtgcaagccaggaacaaaaggcaattcc
tgtgaggacacggtcatgcaagacacgtcttccactgaaggccggagccctgttgctccc
ccatggcccataccccagcaagctgcccagcagaccttctctcgaaaggtgcaggtccca
ccaaaggttggccctatgactcagatggctttcaccattaagcagaagcctcctgttgga
ttacctcagcaaatgcaaccacagatgatacccctttcatctcagacgttgatgatgaat
cttcatcatggccaaacacaggaatatgtgatcaaacccaaatattatccagtaaaaaaa
gtgatttcaggagagcaatccactgagggctcattaccactgagactgggccaggatcaa
cttgcatcaccttttcaattgggaaatcatactggtcgcatcaaggtggtctttacaccc
agcatctgcaaagtgacttgcaccaagggcaactgtcagaacaactgtgagaagggaaat
accaccaccctcatcagtgagaatggccatgctgctgacactctgacagccactaacttc
cgagtagttatttgccaccttccatgcatgaatggaggccagtgcagttctagagataaa
tgccagtgccctcctaattacactggtaaactttgtcagatccctgtgcagagtgccaat
actccaaaactgtatcaccacccacaacaggtgaacaaggctgtaggatctcaagttatc
cactcgactcatactttaccactgacaatgtctggacaacaaggtgtaaaagtgaagttc
cctcctaacatagtgaatatccacgtgaaacatccccctgaagcctcagttcagatacat
caagtttcaagaattgacagcgcatcaacaggacaaaaaacgaaagtacctcagccagga
catccacaggtctcttaccaaggtcttccatatcagaagacccagaaaggacatactact
tacacaaatcaacaacccattcctcatgtgtttcctgtttcagttaaaactcagcttgga
cgctgcttccaggagactattggaacacagtgtggcaaagcacttcctggcctttccaag
caagaagactgctgtggaaccgtgggtacttcctggggttttaacaaatgccagaaatgt
cctaagaagccgtcataccatggatacagccctatgatggaatgcccccaaggctacaag
aggatcaatgctacattttgtcaagatatcaatgaatgtcagttacagggagtatgccct
aatggtgagtgtttgaataccatgggcagctacagatgtacctgcaaaatgggatttgtg
ccagatcctaccctctcaagatgcatagctgatagtcctatggttgctgaagagaaagga
ccctgctaccgatttgttagtgcaggaaaacaatgcatgcatcctctttctgttcagctc
agcaagcagctttgctgttgcagtgttggcaaagcctggggcccacactgtgagaagtgt
cccctcccaggaacagctgcttttaaggaaatctgccctggtggaatgggttatacggtt
tctggccctcacagaaacaagctatatcatcaccctgcagttagagtacagccacctgtc
attggcaagaccccgattactcaacctgttgctaaaggtacttctcctccacctctccca
gcaaaggaagagccagtggaggcactgaccttctcacagaaaagtgagcctgagatggct
gtgcaagaagtggcaactgcagcccctgatcaggaattagtttcactcgatcaagaaaag
caaatcctagagcctggacagccccagctctctcctggaatttcaacaattaacctgcat
ccacagtttccagtagtgattgagaaaacatctcctcctctgcctgttgaagttgctcct
gaagtctctacttcgagtgcaagtcaagtaattgcacctactcaagttacagaaatcaac
gagtgcacagttaatcctgatatctgtggagcaggacactgcgttaatttgcctgtggga
tacacatgcatctgctacgagggatacaaacttaatgatcagcagacaaaatgctctgat
attaatgagtgtaatcagacacctcatctctgttcccttggacgctgtgaaaatacagaa
ggaagtttcctatgtatttgccaagctggattcatggccagtgaagatggaactgactgc
gttgattttgatgaatgttcaagacctgatacttgtggggaaggcttctgtataaatact
gttggctcgtataggtgtgaatattgtgacagtggataccaaatgaacaggagaggggaa
tgtgaagacattgatgaatgcatgaccccaactacttgtccagatgcacagtgtattaat
gctcctggctcttaccagtgcattccttgcagagtgggattcagaggctggaatggacag
tgccatgatataaatgaatgtcagtatggcaatctctgtacaaatggacgttgtgaaaat
actgaggggtctttcagatgtatttgtggtcaaggtttcaaactctctgcatcagaggat
cagtgtgaagatatagatgaatgccagcacaggtcactttgtgtgaatggacactgcagg
aacacagaagggtcttttagatgtgtttgtagccaaggttacgcattatcttctaccgga
gatcagtgtgaagatattgatgaatgccttcaagacagtgatgtttgccttcgaggaaac
tgcatgaatactgatgggtcttacaaatgcacttgtccagatggtttccagcagatagcg
aataggggatgtcaagatatcaatgaatgtgagagatctgacctctgttcacctcacggg
gagtgtctgaacacagatgggtcctaccagtgcatatgtgagcagggcttttctgtgtct
gcagatggcagaacatgcgaagatgttgatgaatgtgtgaacggcacactgtgtggcagt
catgggttctgtgaaaatacggatggctcctatcgctgcctctgttaccaggggtatcag
gatgcacaggatgggcaaggttgtacagatgtgaatgaatgtgaaatgctgagtggggta
tgtggcgaagccctctgtgaaaacgtcgatggttctttcctctgcctgtgttctgatgaa
aaccaggagtatgatccgatgaccggacagtgtcgcttccgtacctcaccagaattgcca
atagaggccgatcaacatgaagatggaaagaaggagtgctactacaatctgaatgatgct
aatttctgtgacaacgtgcttacgtctaatgtaaccaaacaggaatgctgctgtactttg
ggtgctggctggggtgacaactgtgaaatcttcccatgccctgtctttggaactgctgaa
tttactgatttgtgtcctgaagggaaaggtttcattccttctggagaatcatcttacggg
cttcttgctgagaattacaaagatgctgatgaatgccagctctttggacaagaaatctgt
aaaaatggcttctgtttgaatacgcagccaggttatgagtgctactgcaaacagggcacg
tactatgaccctgttaagctccagtgctttgacacggatgaatgtcaggacccaaacagc
tgtattgatggccagtgcattaacacagaaggatcttacaactgtttctgtacacaccca
atggttttggacgcaacagaaaagcggtgcatcagaccagcagattcaagtgaacaaact
gaagaaactgaggtctaccaggatctttgctggcagcatctaagtgatgattttgtttgt
agtcgacctctggttggaaagcagactacctatactgagtgctgttgcttgtatggtgaa
gcctggggcatgcagtgcgcgttgtgtcctatgaaagagtcagaggattatgcccagctg
tgcaacattcctgttccaggatctcgacgtccatatggacaagacgctttggttgacttc
gaggagcactacactccagaaactaatccatactttgttgaagaccgttttctgaacagc
tttgaggagttacaagcagaggaatgtggtattctgaatggatgtgaaaatggccgatgt
gtaagagtccaggaaggctacacctgtgactgctttgatggttatcacctggacatggcc
aaaatgacctgtgttgatgtgaatgagtgcaatgagctgaacaacaggatgtctctctgc
aagaatgccaaatgcattaacacagaaggttcgtacaagtgtttgtgtctccctgggtat
gtaccttcagacaagccaaactactgcacaccactgaactcagaactagacagtgaactg
gagtag
DBGET
integrated database retrieval system
