Cygnus atratus (black swan): 118253678
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Entry
118253678 CDS
T09349
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X2
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118253678 (RNF123)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118253678 (RNF123)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118253678 (RNF123)
Multi subunit type E3
KPC complex
118253678 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118253678
NCBI-ProteinID:
XP_035414164
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All DBs
Position
10:complement(16209107..16259815)
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AA seq
1308 aa
AA seq
DB search
MTSRGAGPALSRKNYRLSTEPEKSKVAGIVNSRLLNDYLHRVFTSADGNQPAAAYRKHLT
FQNLQEHLDRLLAEENGSEDSRDQGAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYHPLQDPPVSDLVKARRLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPAALSSDEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANVLIDPAELQSVTMDDLDEDEESATSAAQSQRPSA
ALAIGGALARPGWLSSPTLGRANRFLSTAAVSLMNPRRPLGTLEKVKVRTLSVEQRTEED
IEGSHGNEGLLLGRPPEEPDQPITENSLLEILDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADLL
RSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPG
LESVDHYPILVAVTGILVRLLVDTDVQGAERATAVMLADPCFQLRSIQYLLGHTEPSALA
AAAPATEKRHFSLNTYTEYISAEELAKVDKMLSHLSEESKQAAATTLPTSEEDLCPICYA
HPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcgaggtgctgggcctgctctctcaaggaagaactacaggctgagcactgag
ccggagaagtccaaggtcgcagggatagtgaacagcaggctgctgaatgactatctgcat
cgcgtctttaccagtgctgatgggaaccagcctgcagctgcgtacagaaagcacctgacg
ttccagaacctacaggaacaccttgaccggttgctagcagaggagaatggctctgaagac
agtcgagatcagggagcagagggccggcttggtccctctactgtagtgttggaccacacg
agcggttttgaggggctcctgctggttgatgatgacttacttggggtgattggccacagt
aactttggctctatcagggccacgacgtgtgtgtataaagggaaatggatttatgaggtg
ctcatctcttcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggagttggagatacaccagattcatatgcatatgatggcaacagggtgcgc
aaatggaacgtgaccactaccaactatggcaagtcttgggcggcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaatggcatatctctggga
actgcttttgataacatcacaagaggtgctggaatggcatacttccctgctatcagtctc
tcattcaaagagtctgttgcttttaactttgggagccgtccacttcggtatccagtggaa
ggctaccaccccttgcaagaccctcctgtctcagacctcgtgaaggctcgcaggctttta
ggctacctgaagaacgtgatccatatcgggatcgatgtgacggaggggaagctggtggag
aaggacacatccatgtggcaattgcagggagaacccacagtgttgatcacattagcccac
atcttcaattatttctcccctctcatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgttgagcatcctggagcgaggaggggcagtggaggcccatccccttattcag
cagctgctggatctcatgtggcttctcatggaggagtatgaagtgcatgagtgcctcaag
cagctactgatgtcactgctgcgggcttacaggttttctcccatcatcccagacctgggt
ttgcaaattcactacctccgtctcaccattgcagtcttgaagcatgagaaatccagaaaa
tatctactcagcaatgttctctttgatgtgctccgttcggttgtgttcttctacatcaag
agcccgcttcgcgtggaggaggctggtttgcaagagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggagagtgctgaggaa
aggctgaggcggcgagcatatgaaagaggctgccagcggctcaagaaacgcatcgaagtg
gtggaaggtctccaggttcagattctgaagttgctgctgaacaacaaagacagaggaggg
ggggaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggaaaatgct
agcaacagagggaacttgactgtgctgtgcccgccagagtacatggtgtgcttcctgcac
cggcttattgctgccctgcgtttcttctgggatggccacaaggcaaagacccctgctgca
ctgagcagtgatgaggcgtatgtccctccccagcttttctataacgggaaggtggattat
tttgaccttcagcgacttggaggtctcctgtctcatctcaagaagactctgaaagatgac
ctggctgcaaaagccaatgtcttgattgaccctgcagaactgcagtcagtgactatggat
gatcttgatgaagatgaggaatcggcaacatcagcagcacagtctcagcgtccctctgcc
gccttggccatcggtggagctcttgccagacctggctggctcagctcgcccaccctgggc
cgcgccaaccgtttcctcagcaccgcggctgtcagcctgatgaacccgcggcggccgctg
ggcacccttgagaaggtcaaagtgcgcacgctgagtgtggagcagcgtacagaggaggac
attgaaggcagccatggaaatgagggtctcttactggggagacccccagaggagccagac
cagcccatcacagagaactccctcctggaaatcctggatggaatagtgatgatgtacaac
ctcagcgtccaccagcagcttgggaagatggttggtgtgtcagatgatgtgaatgagtat
gccatggcactgaaagacacagaggaaaaaatcagccgctgcccaaagaggaggagagac
atccatgaggagctgctgaagagccaaaaggtcttctctgagaaactcaatcacctaagt
cgtcgccttgcttggataaatgtcaccatctattcaaaggagaagatgcaggatatctat
tggctgctgcgagtgtgcatccgcaccatcgagcatggcgacaggacaggctcgcttttt
gctttcatgccagagttctacctcagcgtggctatgaacagctacagtgcactcaagaac
tacttcagccctgtcaatagcatggaggagctcccaggctatgaagagactctgatgcgc
ctcgctgccatcctggccaagcactttgctgactcgaggattgtgggcacagacatccgg
gactccctgatgcaggcgctggccagctatgtctgctacccccactcgctgcgtgctgta
gagaggatcccggaagagcagcggatctccatgatgaagaacctcctggctccctacgag
cagcggccctgggcgcagaccaactggattctcgtcaggctgtggcggggctgtggcttc
gggtacagatacacacggctcccacacttgctgaaaaccaagcctgaggatgccagcctc
cccagcctgcagaagccgtgcccctccaccttgctgcagaggcacatggcagacctgctc
cgcagcgaccgtgacttggcccccagcttcctcaacagcgtcctcaaccagctgaactgg
gccttctccgagttcatcggcatgattcaggagatccagcaggcagcggagcgcttggaa
agaaactttgtggacagccgccagctgaaggtgtgtgccacgtgcttcgacctgtcggtg
agcttgctcagggtgctggaaatgaccgtcacgctggcccccgagatctttctggactgg
aatcgcccatcgtcagagctgctgcttcggaggcttgcccagctcttgaaccaggttctg
aatcgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtttgccaggg
ttggagagtgtggaccattacccaattcttgtggctgtgacgggaatactggtccgactg
cttgtggacaccgatgttcagggggctgagcgtgcgacagcagtgatgctggcagacccc
tgcttccagctgcgctccatccagtacctgctgggccacaccgagccctcagccctggcg
gctgctgccccggccaccgagaagcgccatttctccctgaacacatacacagagtacatc
agtgctgaggagctggcaaaggtggacaagatgctgagccacctgagtgaggagtccaag
caggccgctgccaccacactgcccaccagcgaggaggatctctgccccatctgctacgca
caccccatctcagccatcttcaggccctgctcccacaagtcgtgcaaagcctgcatcaac
cagcacctgatgaacaacaaggactgcttcttctgcaaggccaccatcacaggtgtggac
gacttcaccaagcctgccagctcgtag
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