Cygnus atratus (black swan): 118253731
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Entry
118253731 CDS
T09349
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118253731 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cata01007
]
118253731 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cata03016
]
118253731 (IARS1)
Enzymes [BR:
cata01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
118253731 (IARS1)
Amino acid related enzymes [BR:
cata01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118253731 (IARS1)
Transfer RNA biogenesis [BR:
cata03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118253731 (IARS1)
Prokaryotic type
Other AARSs
118253731 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
118253731
NCBI-ProteinID:
XP_035414327
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All DBs
Position
10:16581082..16686873
Genome browser
AA seq
1265 aa
AA seq
DB search
MVQQVPENITFPNEEEKILELWKNLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNQC
RGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDASVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDNATGKIYILMESRLIALYKSDTEYEILERFPGITLKGKKYKPLFEYFIQCK
DKGAFTVLVDSYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSVPVCPVDASGCFTA
EVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSYKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGVKVTDLHRESIDHLTIPSRCGKGILHRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMAIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILEHKEEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIRALETLFSVLYSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHRDPEALENISSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHM
VLGKRLKGAFKLVMAAIKELKSEQLEEFQETGTIVVEGHELHEEDLRLMYTFDQAAGGSA
QFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSYPEG
DYLDTVIKEHTDFILATIKAALKPYPVPTSKEVLIQETTQLKGSELQLTLVRGGVCQCVG
PACAYVNLKVCANGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNSKLTVFNGKTE
LINKTDLLTLSGKTLHVTTGSAPAVTNSPDALLCQYINLQLVNAKPQECQKGTMGTLLME
NPVGQNGLTYQGLLYETAKVFGLRSRRLKLFLDEAQTQEITKDVSMKNLNMKTVYVRVIP
TTAEC
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacataactttcccaaatgaggaagagaagatactggag
ctctggaaaaatctgaattgtttccaggaatgcctaaagcaatcaaagaatagacctagg
tttaacttctatgatggccctccgtttgctactgggctaccacactatggccatattctt
gcaggaactattaaagacatagtaaccagattcgctcatcagagtgggtttcatgttgac
agaagatttggatgggattgccatggcttacctgtggaatatgagattgacaagacctta
ggtatcaaagggccagaagatgtggcaaagatgggcattgcagaatacaacaaccagtgc
agaggaattgtgatgagatactcgaaggaatgggagttcaatgtaaccagattaggacgc
tggattgattttgaaaatgactataaaactctctatcctgagttcatggagtctgtgtgg
tgggttttcaagcagctgtatgacaaaggactagtatataggggtgttaaggtcatgcct
ttctcaactgcatgtaacaccccactgtccaacttcgagtcccatcagaattacaaggat
gttcaagacccttcagtgattgtgagcttcccgctggatgaagatgcaagtgtctctctt
gttgcttggaccactactccttggaccttacctagtaatctagccctttgcgttaacccg
gaattgcaatacgtaaaattgagagataatgccacaggaaagatttacatcttgatggaa
tccaggcttatagccctatacaaatctgacacagaatatgagatactggagaggtttcct
ggcattacgcttaaaggcaaaaaatataaaccactctttgaatatttcatacagtgcaaa
gataaaggtgcctttactgtgttagtggacagttatgtgaaggaggaggaaggcacaggt
gttgtccatcaggccccctattttggtgctgatgactacagagtctgtgtggattttaat
ataattcagaaagattcagtgccagtttgtcctgttgatgcatcaggctgcttcacggct
gaagtgactgactttgctggacagtatgtgaaggatgcagataagaacatcattaaatta
ctgaaggagaaaggcagactggttcacagcagtagttataagcacagctatccgttctgc
tggaggtcagatactccattaatatacaaagctgtgccgagctggtttgtaagagtagag
cacatggtggagaagctactggagaataatgcacaatgttactgggttccagattttgtg
agggagaagcgttttgggaactggcttaaagatgcacgagattgggctatatctagaaac
cggtactggggaacgcccatcccgttgtgggtcagtgatgattttgaagaggtggtttgt
attggttcaatggcagaattggaagagctgtcaggagtgaaagtcactgatctccatcga
gaaagtattgatcatctgacaatcccttcacgctgtggaaagggcatattgcaccgggtc
cctgaagtttttgattgctggtttgagagcggaagtatgccttatgcacaagtgcattat
ccatttgaaaacaaaaaagaacttgaggatgctttccctgctgacttcattgctgaaggc
attgaccaaacccgaggatggttctacactttgctggtgctgtccactgctctttttgga
aggcctcctttcaagaatgtaattgtaaatggcctagttcttgccagtgatggtcaaaaa
atgagcaaaaggaagaagaattatcctgatccaatggctattgtaaatagttatggagct
gatgcactaaggttataccttatcaattctcctgtggtaagagcagaaaatttgagattt
aaggaggaaggagtaagggacatactgaaggatgtcttcctgccctggtacaacgcatac
cgctttcttgttcagaatgttcagatcctggaacataaggaggagggaagagaattcctt
tacaatgagaacacagttaaggagagcaataacatcatggataaatggattctttctttc
acccaatcactcatacaattcttcaaagctgaaatggcagcttacaggctgtatactgta
gtccctcgattagtgaagtttgtagatattttgaccaactggtatgttagaatgaatcgc
agaagactaaagggtgagaatgggaccgaagactgcattagggccctggaaaccttgttc
agtgttttgtactccatgtgcagacttatggcaccatatactccattcatcactgaactg
atgtaccagaacctgaagacgcttattgatccagcctcagtacaggaaaagaatactgaa
agcatacactacctcatgcttccccaagtgagggaggatctgattgacaaaaaaattgaa
agtgcagtttcttgtttgcagtctgttattgagcttggacgagtaatcagagacagaaaa
accattccagtaaagtatcctctgaaagaagtagttgttatccaccgggatccagaggca
ctggaaaacatcagctctctggagaagtacatacttgaggagcttaacgtacgtcaagtg
acattatctactaacaaagataaatacggagtccggctgagagcggaaccagatcacatg
gtgcttgggaagcgcctgaaaggcgcatttaaacttgtcatggctgcaatcaaagagctg
aagagtgagcagctggaagaattccaggagacaggcaccattgttgtagaaggacatgaa
cttcatgaggaagatcttcgtctcatgtatacctttgatcaggctgcaggaggatctgcc
cagtttgaggcacattccgatgctcaggttttagttctgctagatgttaccccagaccag
tccatggtggatgaaggagttgcccgggaagtgattaaccgcattcagaagcttcgcaaa
aagcgaaatctggttcctacagatgagattacagtgtactacagatcatatccagaaggt
gactacttggatactgttattaaggaacatacagatttcattcttgcaacaataaaggct
gccctaaaaccttacccggtgcctacctcaaaagaagttctcatccaggaaaccacccaa
ctgaagggatcagaactacagcttacacttgtcagaggtggtgtgtgccagtgtgttggt
ccagcctgtgcctatgtcaacctcaaagtttgtgctaatgggacagagcaagatggtgtg
ttgctgttggaaaatccaaaaggagataataccttgaacttcactggacttgtagatgct
gtctcctgcatttttggtcttaaaaattcaaaactgacagtttttaatggaaaaacagaa
ctgataaataaaactgacttgcttactctcagtggaaagactctacatgtgacaacaggg
tcagcacctgctgtgaccaactctcctgatgctcttctctgccagtatatcaacttgcag
ttagtaaatgcaaaaccacaagaatgtcagaaaggaacaatgggaactcttctaatggaa
aaccctgttggtcagaatggattaacataccaaggtcttctatacgaaacagcaaaagtt
tttgggctcagaagcaggaggctaaaattgttcctggatgaagcacaaactcaggagatc
acaaaggacgtctccatgaagaacctgaacatgaagactgtatatgttcgtgttataccc
accacagctgaatgttga
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