Cygnus atratus (black swan): 118255339
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Entry
118255339 CDS
T09349
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118255339 (PKP1)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
118255339 (PKP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Mo25
Motif
Other DBs
NCBI-GeneID:
118255339
NCBI-ProteinID:
XP_035417336
EnsemblRapid:
ENSACYG00000010891
LinkDB
All DBs
Position
24:4098429..4143228
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AA seq
734 aa
AA seq
DB search
MIHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDCLADGYGYGTSRGSYYAKTQTGNSNWGYPLYNGTLKRDVENRRYSSYS
QMEGWGSKHYSKAVCSPTRAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKSQVGGRAEHK
ATLNRQSIYSSCSTQQGTTRTSKKMPARALSCPSSNKPDVVYAQPVMSGKQEVVYGQTHS
SSRICGDEIDGGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAK
LVELLRSTNQNVQRAAAGALRNLVFRNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLT
GLLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGGCNRTREIIDPEVFFNATGCLR
NLSSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPN
KYTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTY
LSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGVKEKGLPRIARLLQSNSSEVV
RSGASLLSNMSRHPILHKTMAHQVLPDVSRLLSFQSGNTNSYGEIMTSACYTLRNLIMSN
PHLGKCYLTSNMLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMG
SLAGTTFRTLSSRF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgattcactctccactgaagacagcgttggcatatgagtgcttccaagaccaggccagc
tccacgctggccctgccctcggatcacaagctgaaaactaagggcacggggaaacagcgg
gtccaagagcaagtgatgatgacggtgaagcggcagaagcagaagtcgtcggtgtcgtcg
agtgtgggacactccaaccgaggttccatgtacgactgtttagctgatggttatggctat
gggacatcccgaggcagctattacgccaaaacccaaacaggaaacagcaactgggggtat
ccgctgtacaatgggaccctgaagcgggatgtggagaaccggcgctacagctcgtacagc
cagatggagggctggggcagcaagcactacagcaaggctgtctgcagccccaccagggcc
ggcagcgattactgctttgtgcagaacatcaagagcagccggagtgagcccgacctctac
tgcgaaccaccccggggcacgctgaggaagagtcaggtggggggccgggcagaacacaag
gcaaccttgaaccgccagagcatctacagcagctgtagcactcagcaaggaactaccagg
acaagtaaaaaaatgccagcgcgggccctctcctgcccctccagcaacaagcccgatgtg
gtctatgcccagcccgtgatgagcggcaagcaggaggtggtttatggacagactcattcc
agctccagaatatgtggtgatgagatagacggcggtacaatgaccatccagaaagccata
caacttctgtgctcctccgatgacaaataccaggccatgggtgcttattacctccagcac
acctgcttccaggatgagtctgccaagcaagaggtctatcggctcgggggaatcgccaag
ctcgtcgaactgctccgcagcacaaaccagaacgtacagcgggcagcggctggagccctc
cgaaatttggtcttcaggaatccgaccaacaagatagaaacccggcggcagaatgggata
agggagtgtgtgagcctcctacggaggacagggaacactgaaattcagaagcagctgaca
ggactgctctggaacctctcctccaccgatgaattaaaggaagagttgatacaggaggcc
ctccccgtcctgacagactgtgttatcatccctttctctggctggtctgatggcggctgc
aacaggacaagagaaattattgacccagaagttttcttcaatgccacagggtgtttgaga
aacctgagttctgcagacatggggcgccagaccatgaggaattaccctggcttgatcgat
tcggtcatgacttatgcccagaactgcgtggcttctaaccgacctgatgacaagtctgtg
gagaattgcatctgcatcctgcacaacctctcctaccgcctggatgccgaagttcccaac
aaatacacccagctcaaccacatggcccggagcgtttacatggacaaaactctcacaggc
tgcttcaacagcaggagtggcaaaatggagaatgatgagtatggtgtcccgcttcctgag
gaggattttaaacccaaagggcccagctggctctaccactccgatgccatccgcacctac
ctgtcccttatggatcagagcaagaaggatgccaccctggaggcttgtgctggagccctg
cagaacctcactgcgagccggggactgatgtccaacgcaatgagccaactgattggtgtg
aaggaaaaaggtttgcctcgcatagcacggctcctgcagtccaacagctctgaagttgtc
cggtctggggcttctttgctgagcaatatgtcccgacatcctattctccacaaaaccatg
gctcaccaggtgctcccagatgtatcacgtctcctgtcattccagtctggaaataccaac
agctatggcgagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaac
ccacacctgggaaagtgttacctgacaagcaacatgctaaataatgtagtaagcctgtgc
cgaaatggctcctgtccgaaagcggctgaagctgctcgcctcctcctgacagatctttgg
tcgaacagggagctgcagagtgtgctgaagcagcaaggatttgataagaacatgatggga
tctttagctggaacaaccttcaggactctctcctccagattttag
DBGET
integrated database retrieval system