Cygnus atratus (black swan): 118256416
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Entry
118256416 CDS
T09349
Symbol
ACTB
Name
(RefSeq) LOW QUALITY PROTEIN: actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
cata04145
Phagosome
cata04210
Apoptosis
cata04510
Focal adhesion
cata04520
Adherens junction
cata04530
Tight junction
cata04810
Regulation of actin cytoskeleton
cata04814
Motor proteins
cata04820
Cytoskeleton in muscle cells
cata05132
Salmonella infection
cata05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118256416 (ACTB)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118256416 (ACTB)
09143 Cell growth and death
04210 Apoptosis
118256416 (ACTB)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118256416 (ACTB)
04520 Adherens junction
118256416 (ACTB)
04530 Tight junction
118256416 (ACTB)
09142 Cell motility
04814 Motor proteins
118256416 (ACTB)
04820 Cytoskeleton in muscle cells
118256416 (ACTB)
04810 Regulation of actin cytoskeleton
118256416 (ACTB)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118256416 (ACTB)
09171 Infectious disease: bacterial
05132 Salmonella infection
118256416 (ACTB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118256416 (ACTB)
03019 Messenger RNA biogenesis [BR:
cata03019
]
118256416 (ACTB)
03036 Chromosome and associated proteins [BR:
cata03036
]
118256416 (ACTB)
03029 Mitochondrial biogenesis [BR:
cata03029
]
118256416 (ACTB)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118256416 (ACTB)
04147 Exosome [BR:
cata04147
]
118256416 (ACTB)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118256416 (ACTB)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
118256416 (ACTB)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
118256416 (ACTB)
NuA4 complex
118256416 (ACTB)
Chromatin remodeling factors
BAF complex
118256416 (ACTB)
PBAF complex
118256416 (ACTB)
GBAF(ncBAF) complex
118256416 (ACTB)
SWR1 complex
118256416 (ACTB)
Mitochondrial biogenesis [BR:
cata03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
118256416 (ACTB)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
118256416 (ACTB)
Exosome [BR:
cata04147
]
Exosomal proteins
Proteins found in most exosomes
118256416 (ACTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
118256416
NCBI-ProteinID:
XP_035419260
EnsemblRapid:
ENSACYG00000004303
LinkDB
All DBs
Position
15:3977195..3980413
Genome browser
AA seq
375 aa
AA seq
DB search
MDDDIAALVVDNGSGMCKAGFAGDDAPXAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatattgctgcgctcgttgttgacaatggctccggtatgtgcaaggccggt
ttcgccggggatgatgcccccngtgctgtcttcccatccatcgtgggtcgccccagacat
cagggtgtgatggttggcatgggccagaaagacagctatgttggtgatgaagctcagagc
aaaagaggtatcctgaccctgaagtaccccattgaacacggtattgtcaccaactgggat
gacatggagaagatctggcaccacactttctacaacgagctgagagtagcccctgaggag
caccctgtgctgctcacagaggctcccctgaaccccaaagccaacagagagaagatgaca
cagatcatgtttgagaccttcaacaccccagccatgtatgtagccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtattgtgatggactctggtgatggtgttacc
cacactgtgcccatctacgaaggctatgccctcccccatgccatcctccgtctggatctg
gctggccgtgacctgacggactacctcatgaagatcctgacagagagaggctacagcttc
accaccacagctgagagagaaatcgtgcgtgacatcaaggagaagctgtgctatgttgcc
ctggatttcgagcaggagatggccacagctgcctctagctcttccctggagaagagctac
gaactccctgatggccaggtcatcaccattggcaatgagaggttcaggtgccccgaggcc
ctcttccagccatctttcttgggtatggagtcctgtggtatccatgaaactaccttcaac
tctatcatgaagtgtgatgtggacatccgtaaggacctgtatgccaacacagtgctgtcc
ggtggtaccacaatgtacccgggcattgctgacaggatgcagaaggagatcacagccctg
gcacccagcacgatgaaaatcaagatcattgccccgcctgagcgcaagtactctgtctgg
attggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgaatccggaccctccattgtccaccgcaaatgcttctaa
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