Cygnus atratus (black swan): 118257169
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Entry
118257169 CDS
T09349
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118257169 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118257169 (PSEN2)
Peptidases and inhibitors [BR:
cata01002
]
Aspartic peptidases
Family A22: presenilin family
118257169 (PSEN2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Motif
Other DBs
NCBI-GeneID:
118257169
NCBI-ProteinID:
XP_035420742
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Position
3:102827944..102853580
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AA seq
458 aa
AA seq
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MITFMNNSDSEDETCNERTSLMSAESPPVPSYQDGLQASEAGEVQIHRKRHAGSSCSPNN
VADGDMSDSGVRARGSALENEDEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTE
KNGQLIYTPFSEDTPSVGQRLLNSVLNTIIMISVIVVMTVFLVVLYKYRCYKFIHGWLIL
SSLMLLFLFTYIYLGEVLKTYNVAMDYPTLILVIWNFGAVGMICIHWKGPLQLQQAYLIM
ISALMALVFIKYLPEWSAWVILGAISIYDLMAVLCPKGPLRMLVETAQERNEPIFPALIY
SSAMIWTVGMAKPDTAARGPSQQTWDAAEDGREHHSSPSHSDSQILETRSPVPSHPITSL
EELEEEERGVKLGLGDFIFYSVLVGKAAATPSGDWNTTLACFVAILIGLCLTLLLLAVFK
KALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatcacattcatgaacaactcagacagtgaggatgagacctgtaatgagagaacatct
ctgatgtctgcagagagccctccagtaccttcctaccaagatggcttgcaagcctcagaa
gcaggggaagtgcagatacataggaagaggcacgcaggtagcagctgcagccctaacaat
gttgctgatggggatatgtctgactcgggtgttcgagcaagagggagtgccttggaaaat
gaagatgaggaactgacgctgaaatatggagcaaagcatgtaatcatgctctttgtgcct
gtcaccctttgtatgattgttgtcgtcgccaccataaagtcagtgcgcttctatacggag
aaaaacgggcagctgatctacactcccttcagtgaggataccccatctgtgggccagcgt
ctcttgaactcggtgttgaacaccatcataatgatcagcgtcattgttgtaatgaccgtc
ttcctagttgttctttataaataccgctgctacaagttcatccatggatggctaatcctg
tcctctttgatgttgctgtttctcttcacctacatatatctcggtgaagtattgaagaca
tacaatgtggccatggattaccccacgctcattttagtcatctggaattttggagctgtt
gggatgatttgcatccactggaaaggccccctgcagctccagcaagcatacctcattatg
atcagtgctctgatggcactggttttcattaagtatctacctgagtggtcggcatgggtg
attctaggtgcaatctccatctatgatctgatggctgttctctgccctaaggggccactg
agaatgctggtagaaactgcacaggagagaaatgagcccatttttcctgcattgatatat
tcctctgctatgatatggacagttggaatggcaaagccagacacagcagcaagaggacca
agtcagcagacatgggatgcagccgaagatgggagagagcaccacagtagcccttcacac
tcagactctcagattttggagacaaggagtcctgttccaagccaccccatcacttcttta
gaggaactggaggaggaggaaaggggtgtgaagctgggccttggagacttcatattttac
agtgttcttgttgggaaagcagctgccacacctagcggagactggaatactacactagcc
tgctttgtagccattcttataggtttatgtttaactcttttattactggctgtttttaag
aaagcattgcctgctcttcccatctccatcacctttggcttgatcttttacttctcgaca
gacaaccttgtgcgaccattcatggacaccctggcctcccaccagctgtatatttag
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