KEGG   Cygnus atratus (black swan): 118258163
Entry
118258163         CDS       T09349                                 
Name
(RefSeq) actin, cytoplasmic type 5
  KO
K05692  actin beta/gamma 1
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03082  ATP-dependent chromatin remodeling
cata04145  Phagosome
cata04210  Apoptosis
cata04510  Focal adhesion
cata04520  Adherens junction
cata04530  Tight junction
cata04810  Regulation of actin cytoskeleton
cata04814  Motor proteins
cata04820  Cytoskeleton in muscle cells
cata05100  Bacterial invasion of epithelial cells
cata05132  Salmonella infection
cata05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118258163
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118258163
  09143 Cell growth and death
   04210 Apoptosis
    118258163
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118258163
   04520 Adherens junction
    118258163
   04530 Tight junction
    118258163
  09142 Cell motility
   04814 Motor proteins
    118258163
   04820 Cytoskeleton in muscle cells
    118258163
   04810 Regulation of actin cytoskeleton
    118258163
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    118258163
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118258163
   05100 Bacterial invasion of epithelial cells
    118258163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cata03021]
    118258163
   03019 Messenger RNA biogenesis [BR:cata03019]
    118258163
   03036 Chromosome and associated proteins [BR:cata03036]
    118258163
   03029 Mitochondrial biogenesis [BR:cata03029]
    118258163
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cata04812]
    118258163
   04147 Exosome [BR:cata04147]
    118258163
Transcription machinery [BR:cata03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118258163
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     118258163
Chromosome and associated proteins [BR:cata03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     118258163
    NuA4 complex
     118258163
  Chromatin remodeling factors
   BAF complex
    118258163
   PBAF complex
    118258163
   GBAF(ncBAF) complex
    118258163
   SWR1 complex
    118258163
Mitochondrial biogenesis [BR:cata03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    118258163
Cytoskeleton proteins [BR:cata04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     118258163
Exosome [BR:cata04147]
 Exosomal proteins
  Proteins found in most exosomes
   118258163
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 118258163
NCBI-ProteinID: XP_035422682
LinkDB
Position
11:complement(9263508..9266041)
AA seq 376 aa
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcagacgaggagatcgctgccctcgtggtggacaacggctcgggcatgtgcaaggcg
ggctttgcgggggacgacgctccccgggctgtgttcccctccatcgtggggcgcccccgg
caccagggcgtgatggtgggcatggggcagaaggacagctacgtgggggacgaggcgcag
agcaagaggggcatcctcaccctgaagtaccccatcgagcacggcatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggccccggag
gagcaccccgtgctgctcaccgaggcgcccctcaaccccaaggccaaccgggagaagatg
acgcagatcatgtttgagaccttcaacaccccggccatgtacgtggccatccaggccgtg
ctgtcgctgtacgcctccggccgtaccaccggcatcgtgatggactctggggacggcgtc
acccacacggtgcccatctacgagggctacgcgctgccccacgccatcctgcgcctcgac
ctggccggccgcgacctcacggactacctgatgaagatcctgacggagcgcggctacagc
ttcaccaccacggccgagagggagatcgtgcgggacatcaaggagaagctgtgctacgtc
gccctggacttcgagcaggagatggccacggccgcctcgtcctcctcgctggagaagagc
tacgagctgcccgacgggcaggtgatcaccatcggcaacgagcggttccgctgccccgag
gccatcttccagccctccttcctgggcatggagtcctgcggcatccacgagaccaccttc
aactccatcatgaagtgcgacgtggacatccgcaaggacctgtacgccaacaccgtgctg
tcgggcggcaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcacggcc
ctggcgcccagcaccatgaagatcaagatcatcgccccgccggagcgcaagtactccgtc
tggatcggcggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaag
caggagtacgacgagtccggcccctccatcgtccaccgcaagtgcttctag

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