Cygnus atratus (black swan): 118258163
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Entry
118258163 CDS
T09349
Name
(RefSeq) actin, cytoplasmic type 5
KO
K05692
actin beta/gamma 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
cata04145
Phagosome
cata04210
Apoptosis
cata04510
Focal adhesion
cata04520
Adherens junction
cata04530
Tight junction
cata04810
Regulation of actin cytoskeleton
cata04814
Motor proteins
cata04820
Cytoskeleton in muscle cells
cata05100
Bacterial invasion of epithelial cells
cata05132
Salmonella infection
cata05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118258163
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118258163
09143 Cell growth and death
04210 Apoptosis
118258163
09144 Cellular community - eukaryotes
04510 Focal adhesion
118258163
04520 Adherens junction
118258163
04530 Tight junction
118258163
09142 Cell motility
04814 Motor proteins
118258163
04820 Cytoskeleton in muscle cells
118258163
04810 Regulation of actin cytoskeleton
118258163
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118258163
09171 Infectious disease: bacterial
05132 Salmonella infection
118258163
05100 Bacterial invasion of epithelial cells
118258163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118258163
03019 Messenger RNA biogenesis [BR:
cata03019
]
118258163
03036 Chromosome and associated proteins [BR:
cata03036
]
118258163
03029 Mitochondrial biogenesis [BR:
cata03029
]
118258163
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118258163
04147 Exosome [BR:
cata04147
]
118258163
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118258163
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
118258163
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
118258163
NuA4 complex
118258163
Chromatin remodeling factors
BAF complex
118258163
PBAF complex
118258163
GBAF(ncBAF) complex
118258163
SWR1 complex
118258163
Mitochondrial biogenesis [BR:
cata03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
118258163
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
118258163
Exosome [BR:
cata04147
]
Exosomal proteins
Proteins found in most exosomes
118258163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
118258163
NCBI-ProteinID:
XP_035422682
LinkDB
All DBs
Position
11:complement(9263508..9266041)
Genome browser
AA seq
376 aa
AA seq
DB search
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaggagatcgctgccctcgtggtggacaacggctcgggcatgtgcaaggcg
ggctttgcgggggacgacgctccccgggctgtgttcccctccatcgtggggcgcccccgg
caccagggcgtgatggtgggcatggggcagaaggacagctacgtgggggacgaggcgcag
agcaagaggggcatcctcaccctgaagtaccccatcgagcacggcatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggccccggag
gagcaccccgtgctgctcaccgaggcgcccctcaaccccaaggccaaccgggagaagatg
acgcagatcatgtttgagaccttcaacaccccggccatgtacgtggccatccaggccgtg
ctgtcgctgtacgcctccggccgtaccaccggcatcgtgatggactctggggacggcgtc
acccacacggtgcccatctacgagggctacgcgctgccccacgccatcctgcgcctcgac
ctggccggccgcgacctcacggactacctgatgaagatcctgacggagcgcggctacagc
ttcaccaccacggccgagagggagatcgtgcgggacatcaaggagaagctgtgctacgtc
gccctggacttcgagcaggagatggccacggccgcctcgtcctcctcgctggagaagagc
tacgagctgcccgacgggcaggtgatcaccatcggcaacgagcggttccgctgccccgag
gccatcttccagccctccttcctgggcatggagtcctgcggcatccacgagaccaccttc
aactccatcatgaagtgcgacgtggacatccgcaaggacctgtacgccaacaccgtgctg
tcgggcggcaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcacggcc
ctggcgcccagcaccatgaagatcaagatcatcgccccgccggagcgcaagtactccgtc
tggatcggcggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaag
caggagtacgacgagtccggcccctccatcgtccaccgcaagtgcttctag
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integrated database retrieval system