Cygnus atratus (black swan): 118258258
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Entry
118258258 CDS
T09349
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04140
Autophagy - animal
cata05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118258258 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118258258 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118258258 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118258258 (PLEKHM1)
Membrane trafficking [BR:
cata04131
]
SNARE
SNARE associated proteins
Others
118258258 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
118258258 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
118258258
NCBI-ProteinID:
XP_035422816
LinkDB
All DBs
Position
25:complement(5719791..5740305)
Genome browser
AA seq
1028 aa
AA seq
DB search
MHSSHADDPKEVIQLIKKQLVSAIKALQKQYVSSDAVVTSDDGNANTLCSALEAVFVHGL
KAKHIKTETGGKGKKAGGRLPLPQPVFWGLLKSITHRNIVSELEQLIFINTDVGRCRAWL
RLALNDGLVECYLKLLLRERPRLPEYYQSTALLLDAEECEFLLSYLQGLTSLTFQLSYKS
AVLNEWTVTPLSLSGLCPVSELLEPLTSSTSEPRRKVSLGSISQSSGSDEIEIQPSVLPI
SKAGVKTKLTSSSLSLNTTGSSQLSSSLGSDSALQPHCAQSPERSEELLSCDSDLGTATA
EDLDKSLQEVLSEFSKAKPSHDAPPDQLVPAMLGCSPPQPGCPPAPPAPSEDARPPPPHT
RHRGNVRALPRGDAGVPAPRPGGTDGAEESGRGALSSSEGSHAVRSPAAEYLLSPLSGCP
KRKSWISEDDFYRPSARESGKSPADINGFVPDGAGEGPAPGLISALDLERLSVPSSRGGK
PKLSPEREQKGFSVVHRRQMGLSNPFRGLLKLGTLERRGAMGIWKEFSCELSPLELRLFL
DHEDRICVESYSLLRCESLALTHSDGRFELVFLGKKLYLRAPSRDEAEDWLDRIREALQK
CRPQLEEEEWETLEYPEDSGEGGDPAAVLQYNEAPGTSFDWISAHEPELDAIKESVLYVD
IDKTWVPFIFSLSLETLKCFKVRNNDKILSNSYGIETIQDILPDTSLGGPAFFKVITSKA
ILKLQAESAEEAASWRELVRGVLASYLEAAEEALTLGGSLDGNSQVLLKSIVKENGFLLQ
YLVAIPVEKGLDSQSFICAGCSRQIGFSFVKPKLCAFSGLYYCDSCHRDNETVIPSRLIH
NWDLTKRGVCRQALKFLTQIRNQPLINLKLVNESLYDHVERMRRILRSREQLKLLGDYLI
MCRSGALKELSKRLDHRNYLLECPHKYSVTDLQQIADGVFETFLQSLIQFASHHVYNCDL
CTQRGFICQICNRSDIIFPFEFDATTRCNDCKTVFHRECQASAQSCPRCERRRRYQREQE
ADGAGPSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgagccatgccgatgaccccaaggaagtcatacagctgatcaagaagcagctg
gtgagcgcgatcaaggcgctgcagaagcagtacgtctcttcggatgccgtcgtgaccagc
gacgatgggaatgccaacaccctctgcagtgccctggaggccgtctttgtgcacgggctg
aaggcgaagcacataaagacagagacgggggggaaagggaagaaagcaggcggccgcctg
ccgcttccccagcctgtcttctggggcctgctgaagagcatcacgcaccggaacattgtc
tcagagctggaacaactcatttttatcaacacggatgtcggccgctgccgggcctggctg
aggctggctttgaacgatggcctcgtggagtgctacttgaagctgctgctgcgggagagg
ccgcggctgcccgagtactaccagtccacggctctgcttttggatgctgaggagtgcgag
ttcctccttagctacctgcagggcttaacatccttaacctttcagctgtcttataaatcg
gcggtgttgaacgagtggactgtcacccctctctccctgtctgggctgtgtcctgtttcg
gagctgctggagcccctgacgtcctcgacatccgagccccggagaaaagtgtcgctgggt
tccatctcccagtcttcgggatcggacgagattgaaattcagccctccgtcctgcccatc
agcaaagccggcgtcaaaaccaagctgacgtcgtcctcgctgagcctcaacacgacgggc
tcgtcccagctgtcctccagcctcggctctgacagcgccctccagcctcactgcgcccag
agccccgagcggagtgaggagctgctctcctgcgactccgacctgggcacggccactgcc
gaggacctggacaagtcactacaagaggtgctgtccgagttcagcaaagccaagccgagc
cacgacgccccaccagaccagctcgtccccgccatgctggggtgctccccgccgcagccc
ggctgccccccagcacccccggcgccctccgaggatgctcgcccgccgccgcctcacacc
aggcacaggggcaacgtccgcgctctcccccggggtgatgctggcgtcccagccccgcgt
cctggcggcaccgatggagcggaggaaagcggccgcggtgcgctcagcagcagcgagggc
agtcacgcggtgcgcagccccgcagccgagtacctcctttctccgctgtcgggttgcccg
aaaagaaagagttggatctcagaagatgatttctacaggccttctgcaagagagagtggc
aaaagcccggctgacatcaacggcttcgtgccagacggtgctggggagggcccggcccca
gggctgatcagtgctctcgacttggaaaggctgtcggtgccttcctcgcggggcgggaag
cccaagctgtcgcccgagcgggaacaaaagggcttcagcgtcgtgcatcgccggcagatg
ggtctttccaaccccttccgaggactcctgaagctcggcaccctggagcggagaggagcc
atgggcatctggaaggagttttcctgcgagctgtcgccactggagctccggctcttcctg
gaccacgaggaccgcatctgcgtcgagagctactcattgctgcggtgcgagtcgctggcg
ctgacgcactcggacggacgcttcgagctggttttcctggggaaaaagctgtacctacga
gctccttctcgagacgaggccgaggactggctggacaggatccgggaggcgctgcagaag
tgccggcctcagctggaggaggaggagtgggagacgctggagtaccccgaagacagcggc
gaaggcggcgatcccgctgctgtcctccagtacaacgaagcgcctgggaccagcttcgat
tggatttcggctcacgaaccagaactggatgcaatcaaagagtctgttctgtacgtggac
atagacaaaacgtgggtcccttttattttttccctgtcactggaaaccttaaagtgcttt
aaggtgaggaacaacgacaaaatcttaagcaacagttacggcatagagacgatccaggac
attcttccagacaccagcctcgggggaccggcgtttttcaaggtgatcacttccaaagcc
atcctgaagctgcaggctgagagcgcagaagaagcagcatcgtggagggagctggtccga
ggggtgctcgcctcctacctggaggcggcggaggaggcgctgacgctgggtggcagcttg
gacggcaactcccaggtcctcctgaagagcatcgtgaaggagaatggcttcttgctgcaa
tacctggtggccatccccgtggagaagggcctggactctcagagcttcatctgcgcaggc
tgctccaggcagattggcttctccttcgtgaagcccaagctctgcgccttctccggtctc
tactactgcgacagctgccaccgggacaacgagacggtgatcccctcgcgcctcatccac
aactgggacctgaccaagcgaggggtctgccggcaggcactgaagttcctcacgcagatc
cgtaaccagccactgatcaacctcaagctggtcaacgagagcctctacgatcatgtggag
aggatgaggagaatcctccggagcagggagcagctgaagctgcttggagattaccttatc
atgtgccgcagcggggccctgaaggagctgagcaagcggcttgatcacaggaactacctc
ttggagtgtccccacaagtacagtgtcaccgatctgcagcagatagctgatggcgtcttc
gagacgttcctgcagtctctgatccagttcgcgtcccatcatgtctacaactgcgacctg
tgcacccagcgaggcttcatctgccagatctgcaaccgcagcgacatcatctttcccttc
gagtttgacgccaccaccaggtgcaatgactgcaaaactgtcttccaccgggagtgccag
gccagtgcccagtcctgcccgcgctgcgagcgccgccggcgataccagcgggaacaggag
gcagacggtgcggggccaagcctctag
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integrated database retrieval system
