Cygnus atratus (black swan): 118258433
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Entry
118258433 CDS
T09349
Symbol
SNRPB
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118258433 (SNRPB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118258433 (SNRPB)
03041 Spliceosome [BR:
cata03041
]
118258433 (SNRPB)
03032 DNA replication proteins [BR:
cata03032
]
118258433 (SNRPB)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118258433 (SNRPB)
Spliceosome [BR:
cata03041
]
Complex A
U1 snRNP components
Sm proteins
118258433 (SNRPB)
U2 snRNP components
118258433 (SNRPB)
Complex B
U1 snRNP components
118258433 (SNRPB)
U4/U6.U5 tri-snRNP components
118258433 (SNRPB)
Complex C
U2 snRNP components
118258433 (SNRPB)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
118258433 (SNRPB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
118258433
NCBI-ProteinID:
XP_035423121
LinkDB
All DBs
Position
16:complement(147827..150598)
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AA seq
240 aa
AA seq
DB search
MTVGKSSKMLQHIDYRMRCILQDGRVFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYTPGRGGPPPPMS
RGAPPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggaaagagcagcaagatgctgcagcacatcgactaccgcatgcggtgcatc
ctgcaggacggccgcgtcttcatcggcaccttcaaggccttcgacaagcacatgaacctc
attctctgcgactgtgacgagtttcgcaagatcaaacctaagaattcaaagcagccagag
cgggaagagaaacgagtccttggtctcgtgttgctgcgaggagaaaacctggtgtccatg
acagttgaagggccacctccaaaagatactggaattgcccgtgtgcctcttgctggagct
gctggaggacctggagttgggagagcagcagggaggggagtaccagctggtgcacccatg
ccccaggctccagcagggttagctggccctgtcagaggagtgggaggaccgtcccaacag
gtgatgacacctcagggccgtggaacagttgcagctgctgcagcagcagccactgctagc
atagcaggagcccccacccagtacacaccagggcgtggaggtcctcctccacccatgagc
agaggagcacctcctccaggaatgatgggacctcctccaggcatgagaccacctatgggc
ccacccatgggaatgccacctggccgaggtgctccgatgggaatgccaccaccaggcatg
agaccaccacccccaggaatgagaggaccccctccacctggcatgcgtccaccaaggccg
taa
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