Cygnus atratus (black swan): 118259909
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Entry
118259909 CDS
T09349
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118259909 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118259909 (GLI2)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118259909 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
118259909
NCBI-ProteinID:
XP_035425682
LinkDB
All DBs
Position
6:complement(26412230..26548575)
Genome browser
AA seq
1544 aa
AA seq
DB search
METSASTAAGKKEGKGVVLEGNGFTETGKKPTPVAAAGAAVAQGVPQHIFPAFHAPLPID
MRHQEGRYHYEPHSIHAIHGPPPLSGSPVISDISLIRLSPHPAGSGESPFSPPHPYVTPH
MEHYLRSVHGSPTLSVISAARGLSPADVAHEHLKERGLFGLPPPPPGANPADYYHQMTLM
AGHPNPYGDILMQSGGAASTAHLHEYLSPVDVSRFSSPRVTPRLSRKRALSISPLSDASI
DLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGTISPAFSFPHPINPVTYQQILTQQ
RGLSSAFGHTPPLIQPSPTFPPRQHMAVISVNPPAAQISSNSNCISDSSQSKQSSESAVS
STVNPVINKRSKVKTEVEGLPPASPTTQVTFLVSPYTMHCCVLQEHLTDLKEDLDKDECK
QEPEVIYETNCHWEGCTKEYDTQEQLVHHINNDHIHGEKKEFVCRWQDCTREQKPFKAQY
MLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS
DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHPRPP
PLKENGDNEASAKQSSKVSEESPEANSTTRSMEDCLQVKTIKTENSVMCQSSPGGQSSCS
SEPSPLGSTNNNDSGVEMNMHSGGSLGDLTALDDNAPVVDSTVSSGNSTVSLQLRKHMTT
MQRLEQLKKEKLKTVKDSCSWVSPAPQARNTKLPPISGNGSVLENSSGSSATLPNPRIME
LSVNEVTMLNQLNERRDSTTSTISSAYTVSRRSSGISPYFSSRRSSEASQLGHRPNNTSS
ADSYDPISTDASRRSSEASQCSGMPGLLNLTPAQHYRLKAKYAAATGGPPPTPLPNMERM
TLKNRISLMDGPEPTLPSIRLPPGPRRCSDGNTYGYTSAAAFPHEVPGNCTRRASDPVRR
PAGDPQALPRVHRFNSTNSMNPFHPPHPADRRNFSLQSYGRSDGSLPRHTYSPRPLSISE
NIAMEAMSGEAEAPVGDDDIMLPDDVVQYIKSQNNGTAAESTSMGYGNEMQNFQGGGKLQ
PPAFPGQRRMAVAEASMSHLGPMMAECPMSFDTPSDMNKNNMPVQWNEVSSGTVDMMSNQ
SKQQFSQGNLAVVQQKQNFGQYQSYNQQQMQLPENSMNVTQQSFMQRNVGMDGQRLNCMQ
LRQQPMSLGPGINPDLGSHTGYNQPHQMLSPSAISSNPNQISPSCSSMAAKPGPHLHPQQ
MDMATDPSLMVSSNSERTMLNQVMHEPSQQNYSSQQTHLNFPMAQEAFHQPIMPSNQPSY
EPQQSMMGSAAQPYPAGMVQPRPPPEPSPASRARGLRTVQQLGYMRTPHPTNTMSPGQEA
TEAVHKRTGDMLPALAQQCADGTRENNLMYYYGQIHMYEQNSSFDNQADCRVRQRQCALN
GKPAALPSPGANQVSSTVDSQGLEPPQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSS
RLTTPRNSLTLPTIPTGISNMAIGDMSSMLTTLAEESKFLNMMS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctgcttcaactgctgctgggaaaaaagaaggaaaaggtgtggttctggag
gggaatggctttacagagacggggaagaaacccactcctgtagcagctgcaggagcagca
gtggcacaaggagtgccgcagcacatttttccagccttccacgctcctttgccaattgac
atgcgccaccaggaaggacgataccattacgaacctcactctatccacgctatccatggc
cctcctcccctgagcggcagccccgtcatctccgacatctccctcatccgcctgtctccg
caccccgccgggtccggcgagtcgcccttcagcccgccgcacccctacgtgacgccccac
atggagcactacctccgctccgtccacggcagccccacgctctccgtcatctccgctgcc
aggggcctcagccccgccgacgtggctcacgagcatctgaaggagcgaggcctcttcggg
ctgcccccaccaccaccgggagccaaccccgcagactactaccaccaaatgacgctgatg
gccggccaccccaacccctacggggacatcctgatgcagagcgggggagcagccagcacg
gcacacctccacgagtacctcagccccgtcgacgtgtcccggttttcaagcccacgggtg
actccgagattaagccgaaagcgagccctgtccatctccccgctgtctgatgccagcatt
gatctccagacaatgatcaggacctccccaaactccctcgtggcatacattaacaactcc
agaagcagctctgcagcgagcggctcctatggccatttatctgctgggacaataagcccc
gcgttcagcttcccccaccccatcaaccccgtgacgtaccagcagatcttgacccagcag
cgaggcctgagctcagccttcgggcacactcctcccctgatccagccgtctcccaccttt
ccccctcggcagcacatggcggtcatctccgtcaacccgcctgcggcacagatcagcagc
aacagcaactgcatctccgactccagtcagagcaagcagagcagtgagtcggccgtgagc
agcaccgtcaacccagtaattaacaagcgcagcaaagtcaagaccgaagttgagggcttg
cctccagcatccccgaccacgcaggtaaccttcttggtttcaccttatacaatgcactgt
tgtgtgttgcaggagcatctgacagacctgaaagaagatctagataaagatgaatgtaaa
caggagcctgaggttatttatgagacaaactgtcactgggaagggtgcacaaaggaatat
gacactcaagagcagctcgtccatcacatcaacaacgatcacatccacggggagaagaag
gagtttgtctgccgctggcaggactgcacgcgggagcagaagcccttcaaggctcagtac
atgctggtggtgcacatgcgaaggcacaccggagagaagccgcacaagtgcacgtttgag
ggttgctccaaagcctattcccgcctggagaacttaaagacacacctgagatcccacact
ggagaaaaaccctacgtctgtgaacatgaaggctgcaataaagccttttccaatgcctca
gatagagccaagcaccagaacaggacgcattccaatgagaaaccctacgtctgtaaaatc
cctggctgcacaaagaggtacacagaccctagttccctcaggaaacacgtcaagaccgta
cacgggcctgatgcccacgtcacgaagaagcagcgcaatgacgttcacccaaggccacct
cctctcaaggaaaatggggacaatgaggcaagcgccaagcaaagcagcaaggtttcagag
gagagccccgaggccaacagcaccacgaggagcatggaggattgcttacaagtcaaaacg
ataaaaacagagaattctgtgatgtgtcagtccagtcctggtggccagtcgtcatgcagc
agtgaaccgtcaccccttggcagcaccaacaacaatgacagtggagtagaaatgaacatg
cacagcgggggaagtctgggagatctgacggcgttggatgacaacgctcctgttgtggac
tcaacggtctcatctggtaattcgacagtcagcctgcagctaaggaaacacatgacgacg
atgcaacgacttgaacagctcaagaaagagaaactcaagacagttaaggattcctgctca
tgggtgagcccagctccacaagccagaaacaccaagctgcctcccatctcaggaaacggc
tctgttctagaaaatagcagtggttcttctgctacgctgcctaatccaagaataatggag
ctgtctgtcaatgaggttacgatgctgaaccaactcaacgagcgccgtgatagtacgaca
agcaccatcagctctgcctacactgtgagccgcagatcatcagggatttccccgtacttc
tccagccgccgctccagcgaggcttcgcagctcgggcaccgtcccaataacacgagctct
gccgactcctatgacccgatttcaactgacgcttcccgtcggtcaagcgaggcgagccag
tgcagcgggatgccgggtctgctaaacctcacgccagctcagcactacaggctgaaagcc
aagtacgctgctgctacagggggccctcctccgactcccctgccgaacatggagaggatg
accctgaagaacaggatctcactaatggacgggccagagcccaccttgccctccatccgc
ctcccgccaggccccaggcgttgcagcgatgggaacacctatggctacacatcggccgca
gcatttccacatgaggttccaggcaactgcacaagacgggcgagtgacccagtgaggaga
cctgctggagaccctcaggccctcccgcgagttcaccgcttcaacagcaccaacagcatg
aaccccttccatcctccacaccccgcagacaggaggaatttcagcctccagagctacggg
cgctccgacgggagcctcccccggcacacctactcgccccggccgctaagcatcagcgaa
aacatcgccatggaagccatgtctggggaggcggaggcacccgttggagacgatgacatt
atgctgccagatgacgtggtgcagtacatcaagtctcagaacaatgggacggcggctgag
agcacttccatggggtacggcaacgagatgcagaacttccagggaggtgggaagctgcag
cccccagcctttcctggccagcgcaggatggcggtggctgaggcgagcatgagccatttg
gggcccatgatggcagagtgtcccatgagctttgacactccctcagacatgaataaaaat
aacatgcctgtccagtggaacgaagtcagctcgggtacggttgatatgatgtccaatcag
tcgaagcagcagttttcacaagggaacttagcagtggtgcagcagaagcagaactttggt
cagtaccagagctacaaccagcagcagatgcagctaccggagaacagcatgaatgtaaca
cagcagagctttatgcaaagaaatgtgggcatggatggtcagaggctaaactgtatgcag
ctgcggcagcagccgatgagcctaggccccggcataaaccccgatctgggctcgcacaca
gggtataaccaacctcatcagatgctgagccccagcgcaatcagcagcaacccaaatcag
atctctccttcttgtagcagcatggcagcaaagcccggaccccaccttcaccctcagcaa
atggacatggcaaccgacccttcgttaatggtcagcagcaacagcgagcgcacgatgctg
aaccaggtcatgcacgaaccgagtcagcagaactactcatctcagcagacccacctgaac
ttccccatggctcaagaggcctttcaccagcccatcatgccctccaaccagcccagctat
gagccccagcagagcatgatgggctcggcggcgcagccgtatccagccggcatggtccag
cctcgtcccccacccgagccgagcccggccagcagagcccgtggcctccgcaccgtgcag
cagctgggctacatgagaactccccaccctacaaacaccatgagcccgggccaggaggca
acggaggctgtgcacaaaagaaccggcgacatgttgcccgcgctggctcagcagtgtgcg
gacggcacgagggaaaacaatttgatgtactattacggccagatccacatgtacgaacaa
aacagcagctttgataatcaggcggactgcagggtcagacagcggcagtgcgcgctgaac
ggcaagccggctgcgctgccttccccgggcgcgaaccaggtgtccagcacggtggactcg
caaggtcttgagccaccccagatagattttgatgccatcatggacgatggggaccactcg
agcctgatgtcgggaaccctgagccccagcatcctgcagaacctctcccagaactcctct
cgcctgacgactccacgaaactctctgacactgcccaccattcccacgggaataagcaat
atggcaataggcgatatgagctccatgttgaccacgctggcggaagagagtaaatttctc
aacatgatgtcctaa
DBGET
integrated database retrieval system
