KEGG   Cygnus atratus (black swan): 118260274
Entry
118260274         CDS       T09349                                 
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
  KO
K06752  MHC class II antigen
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04145  Phagosome
cata04514  Cell adhesion molecules
cata04672  Intestinal immune network for IgA production
cata05164  Influenza A
cata05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cata00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118260274
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118260274
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118260274
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    118260274
   05168 Herpes simplex virus 1 infection
    118260274
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cata04147]
    118260274
Exosome [BR:cata04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118260274
  Exosomal proteins of epithelial cells
   118260274
  Exosomal proteins of breast milk
   118260274
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 118260274
NCBI-ProteinID: XP_035426305
LinkDB
Position
33:complement(660811..663815)
AA seq 251 aa
MGAAGGCGALLGALLGVALAAAATPEPPVHSLAEVLFCQPDVPLLGLALTFDDEQLFWFD
APSSRWQPRLPDFPAWPEATEPPSELVHDTTLCQDLLELLTVYATQHMPMPEAKGIPVAN
VFLKRPLELGRPNTLVCMVGNIFPPAVTIGWQRDGVPVTEGVTNTTYTPVEDLGFVRFSY
LEMTPRAGDIYSCIVTRERDNTSVLTYWVPQDPVPSDVLATALCGAAMALGILLALVGLV
LLAATHRHRRG
NT seq 756 nt   +upstreamnt  +downstreamnt
atgggggctgcgggcgggtgcggggcgctgctgggcgccctgctcggggtggccctggcc
gccgccgccacccccgagccgccggtgcacagcctggccgaggtgctcttctgccagccg
gacgtgcccttgctggggctggcgctgaccttcgacgacgagcagctcttctggttcgac
gccccctcgtcgcgctggcagccgcgcctgcccgacttccctgcgtggcccgaggccacc
gagccgccgtcggagctcgtccacgacaccacgctgtgccaggacctgctcgaattactc
accgtctacgctactcagcatatgccgatgcctgaagccaagggcatcccggtggccaac
gtcttcctgaagcggccgctggagctcggccggcccaacacgctggtctgcatggtgggt
aacatcttcccgcccgccgtcaccatcggctggcagcgggacggcgtccccgtcaccgaa
ggcgtcaccaacaccacctacacccccgtcgaggacctgggcttcgtgcggttctcctac
ctggagatgacgccccgcgccggggacatctactcctgcattgtcacccgcgagcgggac
aacacctccgtgctcacctactgggtgccgcaggaccccgtgccctccgacgtgctggcc
acggcgctgtgcggcgccgccatggcgctgggcatcctcctggcgctggtggggctggtg
ctgctggcagccacccaccgacaccgccgcggttga

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