Cygnus atratus (black swan): 118260283
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Entry
118260283 CDS
T09349
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata02010
ABC transporters
cata04145
Phagosome
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118260283 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118260283 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118260283 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118260283 (TAP1)
Enzymes [BR:
cata01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
118260283 (TAP1)
Transporters [BR:
cata02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118260283 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_25
ABC_ATPase
AAA_22
AAA_29
Rad17
AAA_18
NPHP3_N
RsgA_GTPase
AAA_5
AAA_33
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
118260283
NCBI-ProteinID:
XP_035426325
LinkDB
All DBs
Position
33:582778..589127
Genome browser
AA seq
667 aa
AA seq
DB search
MGAGRRLLESLRPERWRCAVVAALMGASALGEMAVPYYTGRASDWVAREDELAAIWPMVL
LGLSSAVTELACDAAFVGTLSRVHGHLQRRLFAAVLRRDIAELRDEGAGDVAARVTGDAE
ATREALSEALSLLLWYLARGVCLFGTMAWLSPRMALVTALVLPFLLSLPRAIGRLQQGLA
PKVQKALAHASEVAVETFQAMATVRSFANEDGVAARYRQCLHQTHRLEKQDAVLYTVSAW
TSGFSALALKMGILYYGGQLVAAGTISTGDLVTFLLYQLQFTDVVEVLLCYYPTLTKAVG
SSEKIFEFLDREPQVVPSGTLAPSDLRGHLQLEDVWFSYPGRQEPVLKGVSLELRPGEVL
ALMGPPGAGKSTLVSLLLRLHQPTAGRLLLDGHPLSAYRHSYLCHRVATVPQEPVLFARS
LHANIAYGPESWSRAQVTAAACRVGAHNFITRLPRGYDTEVGELGGQLSGGQRQGVAIAR
AVVRDPHILVLDEPTSALDAECQQQVERELFEASGTRRTVLLVTGQVALAARAHQVALLE
GGQVREQGPPSKLLRPGSRYWHLLQDGGRQGTPGDGDKGTGSGDEGQQEPGMGTVQARME
TSGDGDTRSWDGDTGSQGGDTESWDGDTGARDGDTKGRGGDTTTPWDGDTRSWDGDTKGR
DGDPQEQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccggccgccgcctcctggagtcgctgcgccccgagcgctggcgctgcgcggtg
gtggcggcgctgatgggggcctcggcgctcggggagatggctgtcccctactacacgggg
cgcgccagcgactgggtggcccgtgaggacgagctggcggccatctggcccatggtgctg
ctggggttgagcagcgctgtcaccgagctggcctgtgacgccgccttcgtggggacgctg
agccgcgtgcacggccacctgcagcggcgcctcttcgccgctgtcctccgcagggacatc
gccgagctgcgggatgagggggctggggatgtggcagcgcgggtgacgggggatgcggag
gccacccgtgaggccctgagcgaggcgctgagcctgctgctgtggtacctggcgcggggc
gtctgcctcttcggcaccatggcctggctgtccccgcgcatggccctcgtcaccgccctg
gtgctgcccttcctgctgtcgctgcccagggccatcggcaggcttcagcagggcctggct
ccaaaggtgcagaaggcgctggcccacgccagcgaggtggcagtggagaccttccaggcc
atggccaccgtgcgcagcttcgccaacgaggacggggtggccgcgcgctaccgccagtgc
ctgcaccagacccaccggctggagaagcaggatgcggtcctctacaccgtctctgcctgg
accagcggtttctcagcgctggccctgaagatggggatcctctactacggaggacagctg
gtggctgcggggaccatcagcaccggggaccttgtcaccttcctcctctaccagttgcag
ttcactgatgtcgtggaggtcctgctctgctactaccccacgctgacgaaggctgtgggc
tcatcggagaagatcttcgagttcctggaccgggagccacaggtcgtgccctcggggaca
ctggcacccagtgacctgcggggccacctccagcttgaggacgtctggttctcctacccc
gggcgccaggagcctgtcctcaagggcgtgtccctggagctgcgccccggggaggtgctg
gcactgatgggtcccccgggcgcggggaagagcaccctggtgtccctgctgctgcgcctg
caccagcccacggccgggcgcctgctcttggacggccaccccctcagcgcctaccgtcac
tcctacctgtgccaccgggtggccacagtcccccaggagccggtgctctttgcccgctca
ctccacgccaacatcgcctatgggccggagagctggagccgggcacaagtgacagcggca
gcctgccgggtgggcgcccacaacttcatcacccgcctgccccgaggctatgacacagag
gtgggtgagcttggggggcagctctccgggggacagcggcagggggtggccatcgcccgc
gccgtggtgcgggaccctcacatccttgtccttgacgagcccaccagcgccctggacgct
gagtgccagcagcaggtggagcgggagctcttcgaggccagcgggaccaggcgcacggtg
ctgctggtgacagggcaggtagccttggcagcacgggcgcaccaggtggccctgctggag
ggggggcaggtgcgtgagcagggcccccccagcaagctgctgcgccccggcagccgctac
tggcacctgctgcaggatgggggacgccaggggacgccaggggatggggacaagggcacg
gggagtggggatgagggacagcaggagccagggatggggacggtacaagccaggatggag
acatcaggggatggggatacgaggagctgggatggggacactgggagccagggtggtgac
actgagagctgggatggtgacaccggggccagggatggggacaccaagggcagaggtggg
gacactactactccttgggatggagacaccaggagctgggatggggacacaaaaggcaga
gatggggacccccaggagcagtga
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