Cygnus atratus (black swan): 118260735
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Entry
118260735 CDS
T09349
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04137
Mitophagy - animal
cata04141
Protein processing in endoplasmic reticulum
cata04210
Apoptosis
cata04217
Necroptosis
cata04621
NOD-like receptor signaling pathway
cata04622
RIG-I-like receptor signaling pathway
cata04920
Adipocytokine signaling pathway
cata05132
Salmonella infection
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118260735 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118260735 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118260735 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
118260735 (TRAF2)
04217 Necroptosis
118260735 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118260735 (TRAF2)
04622 RIG-I-like receptor signaling pathway
118260735 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118260735 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118260735 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
118260735 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118260735 (TRAF2)
04121 Ubiquitin system [BR:
cata04121
]
118260735 (TRAF2)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118260735 (TRAF2)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118260735 (TRAF2)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118260735 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-RING_6
zf-C3HC4_5
Thioredoxin_3
zf-C3HC4_2
zf-C3HC4_4
DUF5918
Spt20_SEP
MATH
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
118260735
NCBI-ProteinID:
XP_035427072
LinkDB
All DBs
Position
19:11698257..11724346
Genome browser
AA seq
533 aa
AA seq
DB search
MAAANSTPPGSLDLNQPGFSKAILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKK
IISSGPQKCASCIEEGIYEEGISILETSSAFPDNAARREVESLPAVCINDGCTWKGTIKE
YESCHEGNCPFLLIECQACKGLITLNDKERHSERECPERNLNCKYCKLLFYFPDIKAHDE
VCPKFPLTCEGCGKKKIPREKFQDHVKTCGKCKVPCRFKVVGCAEMVENERLPEHETKCL
AEHLYMLLSFVLSLKSGSGDLKHLPALSSSQSNSPLLAANSLCSESELSKSMELSKSLEL
LGRCEALERKTMTFENIVCVLNREVERVSLTAEAYSRQHRLDQEKIESLSNKVRQLERSI
GLKDLAMAEMEEKIRNMEASTYDGVFIWKITDFARKRQEAITGRSPAIFSPAFYTSKYGY
KMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFR
PDVTSSSFQRPITEMNIASGCPLFCPVSMMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaactctactccaccaggctctttggatctaaaccagcctggattttca
aaggcgatactgggaactaaactggaggtgaaatacctctgttcggattgcaagaacatt
ctgaggaggccgtttcaagctcagtgtggacatcgctactgttcttattgtctgaagaaa
atcataagttctggacctcaaaagtgtgcaagctgtattgaggaagggatatatgaagaa
ggaatttctattttggaaaccagctcagctttcccagacaatgcagctcgtcgggaggtg
gaaagtctgcctgctgtctgtattaacgatggttgcacgtggaaggggactattaaggag
tacgagagctgccatgaggggaactgcccgttcctgctgattgagtgccaggcatgtaag
ggactgatcacactgaatgacaaggagcgccactctgagcgggagtgccccgagagaaac
ctcaactgcaaatactgcaaattgcttttctactttcctgatattaaggctcacgatgaa
gtctgccctaagtttccattgacttgtgaaggctgtgggaagaaaaagattccaagagag
aagtttcaggaccatgtgaagacttgtggcaaatgtaaagtgccttgtagatttaaggtt
gttggatgtgctgagatggtggaaaatgaaaggctaccagaacatgaaaccaagtgtctg
gcagagcatctgtacatgctactgagttttgtgcttagcctcaagagtggctctggagac
ctgaagcatcttcctgccctttcctcatcacaaagtaactccccactactggcagcaaac
tctttgtgctcagagtcagagctctccaaatccatggagctctccaagtccctggagctc
ttgggaagatgtgaggcccttgagaggaaaacaatgacctttgagaacattgtctgcgtg
ctcaaccgggaggtggaaagagtgtctctaacagcggaagcctatagtcggcaacatcga
ctagaccaggaaaaaattgaatctctgagtaacaaggttcggcagctggaaaggagcatt
gggctcaaagatctggccatggctgagatggaggaaaagatccgcaacatggaagcttcc
acctacgatggtgttttcatctggaagataacagactttgccaggaaacgccaggaggcg
ataacaggccgctctcctgcgatcttctctccagctttctacacaagcaagtatggctac
aagatgtgtctgcgcgtttacctgaacggggatggcaccgggcgtgggacccatctgtcc
ctgttctttgtggtgatgaaaggacccaatgatgctcttcttcgctggcctttcaaccag
aaggtaactctgatgctcttggatcagaacaaccgggagcacatcatcgatgctttccgc
cctgacgtgacatcctcctccttccagcgacccatcacggaaatgaacattgccagcggg
tgcccgctgttctgccccgtctccatgatggaagcgaagaactcctatgtccgtgatgac
gccatctttattaaagccatcgttgatctcacaggcctctag
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