Cygnus atratus (black swan): 118260787
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Entry
118260787 CDS
T09349
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118260787 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118260787 (IRF5)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118260787 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
118260787
NCBI-ProteinID:
XP_035427142
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All DBs
Position
1:1147983..1155181
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AA seq
494 aa
AA seq
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MTAPPRRVRLKPWLLAQVESQRYPGLQWVDKRQRLFCIPWHHATRHLPPQEDDGTIFKAW
AMETGKFTEGVDEPDPAKWKANLRCALNKSREFRLRYDGTKDAPPKPYKVYEVCEADSAE
AVAGDDFSCSGEEDVSQLQKLMSLSIDGEPAAGGAPWGGGEVGASSAAPQPRCPPDATVH
ARDLLPPYPWPKEEPPFGSTCPVGPFLPGGAVAAPELPPGAAGTAPPPAALAPMEHGVPN
LLISPHLLPLTDLELKFQYRGRQVCVLTISNPHGCRLFHSSLEPTQEQVELFGPLTLEQV
RFPAADGIPNEKQRFYTHQLLDVLDRGLILELQGQDIYAIRLCQCKVFWSGPCAAHCAGP
NPIEREKKTKLFSLEGFLNGLILFQKGQTTTPPPFEIFFCFGEEWPDQKPKEKKLITVQV
VPVAARLLLEMFSGELSWSADSIPLQISHPDLKDRMVEQFKELYQLWQSQQRLPQPPART
EPGPWALPPGSLPQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgccgccgcgccgcgtccgcctgaagccgtggctgctggcgcaggtggagagc
cagcgctacccggggctgcagtgggtggacaagcggcagcgcctcttctgcatcccctgg
caccacgccacgcgccacctcccgccgcaggaggacgacggcaccatcttcaaggcgtgg
gccatggagacggggaagttcacggagggggtggacgagcccgaccccgccaagtggaag
gccaacctgcgctgcgccctcaacaagagccgcgagttccgcctgcgctacgacggcacc
aaggacgcaccccccaagccctacaaggtgtacgaggtgtgcgaggccgacagcgcagaa
gcggtggccggggacgacttcagctgcagcggggaggaggatgtgagccagctgcagaag
ctgatgtccctgagcatcgatggtgagccggccgcggggggtgccccgtgggggggcggt
gaggtgggggcgtcctcggccgccccccaaccccgctgccccccagacgccaccgtccac
gccagggacctgctgcccccctacccctggcccaaggaggagcccccctttggcagcacc
tgccccgtggggcccttcctgcccgggggggcggtggcggcccccgagctgccccccggc
gccgccggcaccgcgccccccccagccgccctggcgcccatggagcacggggttcccaac
ctgctcatcagcccccacttgctgccactgaccgacctggagctcaagttccagtaccgg
ggccgccaggtctgcgtcctcaccatcagcaacccccacggctgccgcctcttccacagc
agcctggagcccacgcaggagcaggtggagctcttcgggccgctgacgctggagcaggtc
cgcttccccgccgccgacggcatccccaacgagaagcagcgcttctacacccaccagctg
ctggacgtgctcgaccgcgggctcatcctggagctgcagggccaggacatctacgccatc
cgcctctgccagtgcaaggtcttctggagcgggccctgcgccgcccactgcgccggcccc
aaccccatcgagagggagaagaagaccaagctcttcagcctcgaggggtttctcaacggc
ctgatcctgttccagaaggggcagaccaccacgccgccccccttcgagatcttcttctgc
ttcggcgaggagtggccggaccagaagcccaaggagaagaagctgatcacggtgcaggtg
gtgccggtggcggcgcggctgctgctggagatgttctcgggggagctgtcgtggtcggcc
gacagcatcccgctgcagatctcgcaccccgacctgaaggacaggatggtggagcagttc
aaggagctctaccagctctggcagagccagcagcgcctgccgcagcccccggcgcgcacc
gagcccggcccctgggcgctgccgcccgggtccctgccccagtga
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