Cygnus atratus (black swan): 118261406
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Entry
118261406 CDS
T09349
Symbol
VDR
Name
(RefSeq) vitamin D3 receptor isoform X2
KO
K08539
vitamin D3 receptor
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cata01009
]
118261406 (VDR)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118261406 (VDR)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cata03310
]
118261406 (VDR)
Protein phosphatases and associated proteins [BR:
cata01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118261406 (VDR)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118261406 (VDR)
Nuclear receptors [BR:
cata03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
118261406 (VDR)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
118261406
NCBI-ProteinID:
XP_035428123
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Position
29:complement(1036413..1073332)
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AA seq
480 aa
AA seq
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MSVRERAVGRQRLSAVVLGRKQTLRAGGSMSQLQSSWEAHRQDMAYLPDPDMETVAASTS
LPDPAGEFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKI
TKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQ
QKVIDILLEAHHKTYDPTYSDFTKFRPPVRTRSSSRVAARSSSMLTQDFSSEDSTDAFGS
DAFSTFPESVEPPMFSNLVLSEENDESSSMNIEFSHLSMLPHLADLVSYSIQKVIGFAKM
IPGFRDLTAEDQIALLKSSAIEVIMLRSNQSFTLEDMSWTCGSADFKYKVSDVTQAGHSM
DLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVEAIQDRLSDILQTYI
RCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaagggaacgtgctgtcgggaggcagcgtctcagcgccgtggtgctggggagg
aagcagacgctgagagcgggtgggtccatgtcccagctccagagctcctgggaagcgcac
cggcaggacatggcttatctcccagacccagacatggagaccgtggctgccagcacgtcg
cttcccgacccagccggcgagttcgacaggaacgtgccccgaatctgtggggtctgtggg
gacagagccacgggctttcacttcaacgccatgacctgcgaaggctgcaagggcttcttc
aggcgaagcatgaagaggaaggcgatgttcacgtgtccgttcaacggcgactgcaaaatc
accaaggacaaccggcggcactgccaggcctgccggctgaagcgctgcgtggacatcggc
atgatgaaggagttcatcctgacggacgaggaggtccagaggaagcgcgagatgatactg
aagcgcaaggaggaggaggcgctgaaggagagcctgaagcccaagctctcggaggagcag
cagaaagtcatcgacatcctcctggaggcccaccacaagacctacgaccccacgtactcc
gacttcaccaagtttcggcccccggtgagaaccaggtccagcagcagggtggcggcgcgg
tcctcctccatgctcacccaggacttctcctcggaggactccaccgacgccttcggctcc
gatgccttcagcacgttccccgagtccgtggagcccccgatgttttcaaacctggtcctg
tccgaggagaacgacgagagctcctccatgaacatcgagttctcccacctctccatgctc
ccgcacttggccgacctggtcagctacagcatccagaaggtgatcggctttgccaaaatg
atcccgggattcagggatctgaccgcagaggaccagatcgccctgctgaaatccagcgcc
atcgaggtgatcatgctgcgctcaaaccagtccttcaccctcgaggacatgtcgtggacc
tgcggcagcgctgacttcaagtacaaagtcagcgacgtcacccaggccggccacagcatg
gacctgctcgagccgctcgtgaaattccaggtcggcttgaagaagctgaaccttcacgaa
gaagagcacgtgctgctcatggccatctgcatcctgtccccagatcgccccggcgtgcag
gacacctcgctggtggaggccatccaggatcgcctctcggacatcctgcagacctacatc
cgctgccggcacccgccgcccggcagccgcctgctctacgccaagatgatccagaagctg
gccgacctgcgcagcctcaacgaggagcactccaagcagtaccgctgcctctccttccag
cccgagcacagcatgcagctcacgccgctggtgctcgaggtcttcggcaacgagatctcc
tga
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