KEGG   Corynebacterium atrinae: CATRI_12210
Entry
CATRI_12210       CDS       T09346                                 
Symbol
casD
Name
(GenBank) CRISPR system Cascade subunit CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
catr  Corynebacterium atrinae
Brite
KEGG Orthology (KO) [BR:catr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:catr02048]
    CATRI_12210 (casD)
Prokaryotic defense system [BR:catr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    CATRI_12210 (casD)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: WJY64491
LinkDB
Position
complement(2505226..2505888)
AA seq 220 aa
MQSWGDSSRYKQRTTGQVPTKSGIIGLLAAAEGRRRTDAVEDLAELTLAVRVDQPGSLLR
DYQTAQAESAKHASLVTRYYLSDATFVAAVESPHREILDGLAASLRNPRYPLYLGRRSCP
APANLVLKVVDQSASEALRSEPWHASDFHKKARAKNVELPIYRDALPGETGVARQDVPVS
FSQEHRIYSWREVILETPGVTLSNDLGTSVDPFFETVISA
NT seq 663 nt   +upstreamnt  +downstreamnt
atgcagtcatggggtgattccagccgctacaaacagcgaaccaccggacaggtaccgacc
aagtccggaatcattggccttctggctgccgccgaaggacgccgtcgcactgatgctgtt
gaggacttggcggagttaacactcgcagtacgggttgaccagcccggaagcctgctgcgg
gactatcagacggcgcaagcagagtcagcgaagcacgcaagcctggtcactcgctactat
ctctccgatgccacttttgtcgctgccgtggagagccctcaccgtgagattcttgatggg
ttggctgcgtcactgcggaatccgcgctaccctctttacctcggtcgacgaagctgtccc
gcaccagcgaacttggtgttgaaggtagttgatcaatctgcgtcggaggctttgcggtca
gaaccatggcacgcctccgactttcacaaaaaggcgcgagctaagaacgtggaacttccg
atctatcgggatgcacttcccggcgaaaccggagttgcgcgtcaagatgttccagtctcc
ttttctcaggaacaccgtatatatagctggagggaggtcattctcgaaactccgggagtg
accttgtcgaatgatctgggcacatcagtcgatccgttttttgagacggtgatctccgca
tga

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