Cercocebus atys (sooty mangabey): 105573014
Help
Entry
105573014 CDS
T07242
Symbol
APOBEC3F
Name
(RefSeq) LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3F
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03250
Viral life cycle - HIV-1
caty05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105573014 (APOBEC3F)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
105573014 (APOBEC3F)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caty03019
]
105573014 (APOBEC3F)
Messenger RNA biogenesis [BR:
caty03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105573014 (APOBEC3F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC_C
APOBEC3
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
Toxin-deaminase
DUF7136
Motif
Other DBs
NCBI-GeneID:
105573014
NCBI-ProteinID:
XP_011887392
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MNPQIRNLMERMDPTTFDYNFENEPILYGRSYTWLCYEVKIKKYPSKLLWDTGVFQGQVY
FQPQYHAEMCFLSRFCGNQLPAYKRFQITWFVSWNPCPDCVAKVTEFLAEHPNVTLTISA
ARLYYYWEKDXRRALRRLHQAGARVKIMDYEEFAYCWENFVYNEGQSFMPWDKFDDNYAF
LHRKLKEILRNPMEATYPHIFYFHFKNLRKAYGRNESWLCFTMEIIKQRSTVSWKRGVFR
NQVHPESRCHAERCFLSWFCEDILSPNTDYQVTWYTSWSPCLDCAGEVAEFLARHSNVKL
AIFAARLYYFWDTHYQQGLRSLSEKGASVEIMGYEDFKYCWENFVYNGDEPFKPWKGLKY
NFLFLDSKLQEILE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacagatcagaaatctgatggagcggatggatccaaccacattcgactacaac
tttgaaaatgaacccatcctctatggtcggagctacacctggctgtgctacgaagtgaaa
ataaagaagtacccctcaaagctcctttgggacacaggggtctttcaaggccaggtgtat
ttccagccgcagtaccacgcagaaatgtgcttcctctctcggttctgtggcaaccagctg
cctgcttacaagcgcttccagatcacctggtttgtatcctggaacccctgcccggactgt
gtggcgaaggtgaccgaattcctagctgagcaccccaatgtcaccctgaccatctccgcc
gcccgcctctactactactgggaaaaagattagcgcagggcgctccgcaggctgcatcag
gcaggggctcgcgtgaagatcatggactatgaagaatttgcatactgctgggaaaacttt
gtgtacaatgaaggtcagtcattcatgccttgggacaaattcgatgacaattatgcattc
ctgcaccgcaagctaaaggagattctcagaaacccaatggaggcaacgtatccacacata
ttctacttccactttaaaaacctacggaaagcctatggtcggaacgaaagctggctgtgc
ttcaccatggaaattataaagcagcgctcaactgtctcctggaagaggggcgtcttccga
aaccaggtccatcctgagagccgttgtcatgcagaaaggtgcttcctctcctggttctgc
gaggacatactgtctcctaacacagactaccaggtcacctggtacacatcttggagccct
tgcctagattgtgcaggggaggtggccgagttcctggccaggcacagtaatgtgaagctc
gccatctttgctgcccgcctctactacttctgggatacacattaccagcaggggctccgc
agcctgagtgagaaaggggcctccgtggagatcatgggctacgaagattttaaatattgt
tgggaaaactttgtgtacaatggtgatgagccgttcaagccttggaagggactaaaatac
aactttctattcctggacagcaagctgcaggagattctcgagtga
DBGET
integrated database retrieval system
