Carassius auratus (goldfish): 113038263
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Entry
113038263 CDS
T07313
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113038263
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
ABhydrolase-like_N
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
113038263
NCBI-ProteinID:
XP_026051336
Ensembl:
ENSCARG00000004642
UniProt:
A0A6P6IUF1
LinkDB
All DBs
Position
21:complement(4243764..4317998)
Genome browser
AA seq
1571 aa
AA seq
DB search
MNSSVDISLKKALKTPPTRRTAEDLNTIYTHLFHMDVLCHLREHQLRSMCMTARYERYDA
NHVLFYADSISSCWFVLLSGSVLVKEHMYLARCCFGTQRGGRRGSECITLEPSEMIVVEN
GSESDDAALQGNSRRRVHTVNAGGERQLIVDATLPGDLSKMHLTDHAHQQMHMPPSQSGC
SIASDSGSSSLSDIYQATESEMGDVDLSGLPEAPVDSEEEEEDEDIERSSEALLGRDLVR
ECLEKDAVDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCRVMMFEVVEQEGTIILQDKQ
QLDLWYVILNGAVEISYGDGRIEILCMGNSFGISPSLDRQFMNGVVCTKGEDCQFVCIAQ
EDYCRILNHVEQNTHKEEEEGEIVMVKEHRELDRSGTRKGHIVIKGTPERLIMHLVEEPS
VVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLRDTVTRIVLLWVNNHFNDFEGDP
VMTQFLEDFEKLLDSSKMKGHLRLLNIACAAKAKCRQITLQKPSRESPLFFTLQGGSERS
FGIFVETVEEDSKAAEAGLKRGDQILEINGQNFENISYSKAMDILKNNTHLSLTVKTNIF
VFKELQSRVRNEKKNGGPHIPKIQERKSKCFSIPDLPGDLEFPSDSKSRKKLKANTVSGG
RNKIRKMLEKTRFSILPPKPFSDSGMSQSQDDSIVGTKQCRHSVAIMPIPGSLSSSSPDL
FQPAASALDFSNPSVAGFYYVQDQVIRVFKADQQSCYIIISKDTTAKDVVSQVVSEFSLI
ATAETYSLCEVSVCPEGFIKQRRLPDQLSKLADRIQLNGRYYLKNNMETETLCSDEDAQE
LLRESQIGLLQLSTVEVAAQLSMRDFSLFRNIESTEYVDNLFKLDPGGGSGSYLKQFEEV
INQETFWVATEILREPNALKRMKTIKHFIKIALHCRECKNFNSMFAVISGLNLAPVARLR
STWEKLPSKYEKLFRDLQDIFDPSRNMAKYRNILSSQSVQPPIIPLFPMVKKDLTFLHEG
NDSIVDGLVNFEKLRMIAKEIRNVVRMTSANMDPALMFRQRKKRWKSLGSLSQGSTNSNL
LDVQGNHKKRVRRSSLLNAKKLYEDAQMARKVKQYLAHLEVETDEEKFQIMSLQCETAYS
TLSKYPNERRSPKSDMSSVSLRSSGVSSAKSQNRVSQVLQVPPVSLYPLRKKSIAKDLSA
SFAPNSPQTLKKAAGAADDTSLKRPEDTSSVSSLHSSPTISPQGSPRKVGRAPRQNFGQP
NLSGSSSSLASEVGVRTAGGRSGGIGYALLPSGRSDLSDSSEISSRSSIVSNGSVDSMPT
APSIIVPSETPTDAPADCSQPGTSSSSAVRDPSFLFSRSAEELTVPEQTSDSGRGSWTSC
SSNSHDNLQTLPAQRALDLLNHRHTPLCGPIAEVEISPGLTEDSSSRDGSELGRSRQSWT
SSSSLSDTYEGSYSTVKRKTQDQQSTDASYKTVTSSTEKGLIVYCVTSPCKDDRFKAPPP
TPPGYQGLALGDAVQDGGVLRPAHVKPPEYSVALQRSKLRHSLAEPSLSRTPSVTLHSHA
DSEEDEQVSAV
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctcagtggatatatcgctgaagaaagcgctgaaaactcctccgacacgacga
acggctgaggacctgaacaccatctacactcatctgttccacatggatgtgctgtgtcac
ctcagagaacatcagctcaggtccatgtgcatgacggccaggtacgagcgctatgatgct
aaccatgttctcttctatgctgacagcatctcctcgtgctggttcgtcctgctctcgggc
tcagtgctggtcaaggagcacatgtatctggcgcggtgctgttttgggacgcagcgtgga
ggacgccgaggctctgaatgcatcactttagagccgtctgagatgattgtggtggagaac
ggcagcgagagcgacgacgcggctctgcagggaaactcgcgccgccgcgtccacacggtg
aacgccggaggagagcgccagctgatcgtagacgccacgcttcctggtgacctcagcaag
atgcacctgacagaccacgcccaccagcagatgcacatgccgcccagccaatcaggatgc
agcatcgccagtgactcggggagcagcagcctatcagacatctaccaggccaccgagagc
gagatgggagacgtggatctgtccggtctgcccgaagctcctgtggactcggaggaagag
gaggaggatgaagatatcgagcgctcctccgaggctcttctgggcagagatctggtgcga
gagtgtttggagaaggatgcggtggatcggaccgatgacgacatcgagcagctcctggag
ttcatgcatcagctgccggccttcgctaacatgaccatgtccgtcaggagggagctgtgt
cgggtcatgatgttcgaggtggtggaacaggaaggcaccatcattcttcaggacaaacag
cagctggacctgtggtacgtgatcctgaatggtgctgtagagatcagctatggagatggc
cggatagagatcctgtgcatgggcaacagcttcgggatctcgccgtctctagacagacag
ttcatgaacggggttgtgtgcacaaaaggagaagactgccagtttgtgtgcatcgcacaa
gaggactactgccgcatcctcaaccatgtggagcagaacacgcacaaggaggaggaggag
ggcgagatcgttatggtgaaggagcaccgagagctggaccgcagcggcaccaggaagggc
cacatcgtcattaagggcacacctgagcgtctgatcatgcacctggtggaggagccgtca
gtggtggatcccacttacattgaggacttcctcctgacgtaccgcaccttcctgtccagc
cccatggaagtgggcaagaaacttctggaatggttcaaagtggacagtctcagagacacg
gtgacgagaatcgtgttgttgtgggtaaacaatcactttaacgactttgagggcgatccg
gtcatgactcagttcctggaggacttcgagaagttactggactcctcgaaaatgaagggg
catctgcgtctgctgaacatcgcgtgtgctgctaaagctaagtgtcgtcagatcaccctg
cagaagccgtccagagagtctccgctgttcttcacccttcagggcggcagcgagcgcagc
ttcggcatcttcgtggagactgtggaggaggacagtaaagcggcagaagcagggctcaag
cgcggagatcagatcctggagatcaatgggcagaactttgagaacatctcgtactccaaa
gccatggatatcttgaagaacaacacacacctctctcttactgtgaagaccaacatcttc
gtttttaaagagcttcagagccgcgtgaggaacgagaagaagaacggcggtcctcacatc
cctaagattcaggagaggaagagcaaatgcttctctatcccggatctgcccggtgacttg
gagttcccctcggacagcaagagccgcaagaagttaaaggccaacacagtgtctggagga
cgcaacaagatccgtaagatgttggagaagaccagattcagcatcctgcctccgaagccc
ttcagtgacagtggcatgtctcagtctcaggacgacagtatcgtgggcactaaacagtgc
cggcacagcgtggctataatgcccatcccgggcagcctgtcgtccagcagtcctgacctg
tttcagccggccgccagcgctctggacttttccaacccctcagtggctggtttctactac
gttcaagatcaggtgatccgcgtgttcaaggccgaccagcagagctgctatatcatcatc
agtaaagacaccacagctaaagatgtcgtctcgcaagtggtcagtgagttcagcctcatc
gctactgcagagacctactcgctgtgtgaggtttctgtttgtcctgaaggattcatcaaa
cagcgccgactgcccgaccagctctcaaagctagcggaccgcatccagctcaacggcagg
tactacctgaagaacaacatggagaccgagacgctttgctctgatgaagacgctcaggag
ctcttgagggagagtcagatcgggctcctgcagctcagtactgtggaggtggcagcacag
ctctctatgagagacttcagcctgtttcgtaacatcgagtccaccgagtacgtggacaac
ctgtttaagctggaccccggcggtggaagcggcagctacctgaagcagttcgaggaggtc
atcaaccaggagaccttctgggtggccactgagatcctgcgcgaacccaacgcactcaaa
cgcatgaagaccatcaagcactttatcaagatcgctctgcactgccgcgagtgcaagaac
ttcaactccatgttcgccgtcattagtggtcttaatctggctccagtagctcgattgagg
agcacgtgggagaaactacccagtaagtatgagaaactcttccgtgacctccaggacatc
ttcgacccgtctcgcaacatggccaaataccgcaacatcctgagcagccagagcgtacag
cctcccatcatccccctgtttccaatggtcaagaaagacctcaccttcctgcacgaaggt
aacgactcgattgttgacggcctggtgaatttcgaaaagttacgaatgatcgccaaggag
atccgaaatgtggtgcgcatgacgtcagccaacatggacccagcgctcatgttcagacag
aggaagaagaggtggaagagtttagggtctctgagtcagggcagcactaactcaaacctg
ctggacgttcagggcaatcacaagaagcgcgtgcgccgcagctctctgctcaacgccaag
aagctgtacgaggacgcccagatggcacgtaaggtgaagcagtacctggctcacctggag
gtggagacggacgaggagaagtttcagatcatgtcactgcagtgcgaaacggcctacagc
acactgtctaagtacccgaacgagcggcggtcccctaaatcagacatgtcctcggtgtcc
ctgcgctcctccggtgtgtcttcagccaagtctcagaaccgtgtctctcaggtgctccag
gttcctcccgtcagcctttaccctctgcgcaagaagagcatcgccaaagacctgtctgct
tccttcgctcccaactcacctcagacgctgaagaaagcagctggcgcagccgatgacacg
agcctcaagagaccggaagacacgtccagcgtctcgtccctgcactccagtcccaccatc
tccccacagggatctcctcgcaaggtgggcagagctcccagacagaacttcggtcagccg
aacctgtcgggttcgtcctcgtctctggccagcgaggtcggcgtgaggacggcaggagga
cgctcgggtggcataggttacgcactcttgccctccggcagatccgacctgtccgactcc
agcgagatctcctctcgctccagcatcgtcagtaacggctccgtggactccatgcccaca
gcgccctccatcatcgtcccgtctgagacgcccacagacgctccagccgactgcagtcag
cccggcacgagttcatcttcagccgtgagggatcccagcttcctgttctcccgcagcgca
gaggagctgacggttcccgaacaaacctcggacagcggccgcgggagctggacctcctgc
tctagtaactctcacgacaacctccagactcttccagcccagcgagctctggacctgctc
aaccatcgccacacgcccctgtgcggcccgatcgcagaggtggagatcagcccgggtttg
acagaggacagcagctccagagacggatctgagctcggtcggtccagacagagctggacg
tcctctagttccctgtcggacacctacgagggcagctacagcaccgtcaaacgcaagacg
caagatcagcaaagcacagacgcttcgtacaagaccgtcacgtccagcacggagaaggga
ctcatagtgtactgtgtaacgtcaccctgcaaagacgataggttcaaagcgccgcccccg
actccgccggggtaccagggcctggcgctgggcgacgccgtgcaggacggaggagtcttg
cggccggctcacgtaaagccgcccgagtatagtgtggccctgcagaggtccaagctgcga
cacagcctcgccgagcccagcctgtccagaacgcccagtgttactctccattctcacgcc
gatagtgaggaggatgagcaggtttctgctgtttga
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integrated database retrieval system
