Carassius auratus (goldfish): 113041936
Help
Entry
113041936 CDS
T07313
Name
(RefSeq) vascular endothelial growth factor receptor 1-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
caua04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113041936
04020 Calcium signaling pathway
113041936
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113041936
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
caua01001
]
113041936
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113041936
Protein kinases [BR:
caua01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
113041936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
Izumo-Ig
Ig_6
C2-set_2
C1-set
C2-set
Ig_5
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
113041936
NCBI-ProteinID:
XP_026056306
Ensembl:
ENSCARG00000015256
UniProt:
A0A6P6J7S1
LinkDB
All DBs
Position
24:complement(907218..946733)
Genome browser
AA seq
1291 aa
AA seq
DB search
MFDILFVMIFGLSGRVLTKDTDTKGRFNSPVLDVTEKQLIIERNQTLQLNCRGRWELQWV
LPSGVPKVYHGTQIEKTVCGKKNNQYCSRLTLSPALAQHTGSYRCRYRQKQHKQASVYVY
IRDSQQPFVKMHSEIPDVVYMKEGEPLVFPCRVTNPDAKVLLVKESVSAFNIHRLAPDHR
NIIWNSRQGFTIRTPTFFYIGLFSCETVVNGVKYSNKFLTHRPVNEILDVYLNSTGLVHT
LQGQMLALNCTVTAAWNTRVSISWTYPQKANGSANIIRRISRSQTNMLFYSLLTIPRLSK
ADRGLYKCHVTSGPSKRETNTTVIVYDQPFIRLKHRDGPVVQASAGQKSFRLTPKLRAFP
APEVIWLKDGMIAAERCSRYHVDGFSLVIRDVAEEDAGIYTILTGIQQYGLYQNLTLTLV
VNVKPQIGEKTVSSQQAGTVQRGSRQALHCTSHGVPPPQIQWLWHPCPPKGLCEKPPPSS
WTAVSEKTEVTSTHNPILTVSYRQEVLEGKNKTVGVLTVGEALISGIYRCVASNLMGRDE
LDISFYVTDVKGGLIVSLEEEPREGGDLHLVCIANRHLYSDLSWYRFTNQSTTSEGASDL
RGELKEGQFSHTLELLLKNVTAQDSGTYRCSATHLLTGEHTHLDTTVEVTVLQAPVLLRN
LSDHSVNVSKSVTLRCPSRGIPHPQITWYKDQRKLQQVSGIMLFPEEGTLHIDRITVEDQ
GLYTCKATNERGSVESSAHIWVQSSSESLSLEIPTLACTCVVATLFWLLLTLLIRKLKQP
NSTNGKAEYLPIILHPGDEHLVENCDRLQYDPAQWEFPRDRLQLEKPLGRGAFGRVMQAS
AFGICSSASCTTVAVKMLKDGATPSEHKALMTELKILNHIGHHLNVVNLLGACTKPGGPL
MIIVEYCKFGNLSAYLKSKREVFLLNRVSREEEGGMKEGFKARLTSVSSSQSNASSGFSE
EKGEISEEDSGSLPESNSPLLLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSNNN
VVKICDFGLARDVYKDPDYVRKGDARLPLKWMAPESIFDKVFTAQSDVWSYGVLLWEIFS
LGASPYPGLNIDEAFCHRLKQGTRMCPPEYSTPEIYSIMMACWENNPEDRPSFSALVEIL
GDLLQTCVQQDGKDYIPLNAFISGEGNTVTPHIVQKDISQKSLGTSSYSSSGKIKAISTF
EDLHKEIPDDNQSDSGMVLPSEELIRVKWTDRFKTQNITKFFSKGENQHMKLPCMNSAPC
CHQREVPPVCSSERCCSPPPDYEAALLYPCF
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatattatttgtgatgatatttggattgtcagggcgtgttctgacaaaagat
acagacacaaaagggaggttcaattctccagtgttggatgttactgaaaagcagcttatt
atagagagaaatcagacacttcagctaaactgcaggggtcggtgggagctccaatgggtt
ttgccatcaggcgtcccgaaagtctaccacggcacccagatagaaaagactgtatgcggg
aagaaaaataaccagtactgcagccgcctgacgctcagtcctgctttagctcaacacact
ggctcttaccgctgcaggtaccgccaaaagcagcacaaacaggcctctgtgtacgtctac
atcagagatagccagcagccgtttgtaaagatgcactcggagatcccagatgtggtgtac
atgaaggagggagagccgttggtgttcccctgcagagtcacaaacccggatgccaaagtc
ttgttggtcaaggagagtgtctcagcttttaatatccaccggttagctcctgatcataga
aacatcatctggaacagcaggcaaggtttcactatccgtactcccacattcttctacatc
gggctattttcctgtgagactgtcgtcaatggagtcaaatatagcaacaagttcttgact
cacagaccagtgaatgagattctggatgtgtatttgaacagcacgggtttggtccacaca
ttacagggccagatgttagcactgaactgcaccgttacagctgcatggaacaccagggtt
tccatcagctggacgtacccacaaaaggctaatggatctgccaatatcatcagacgcata
tcaaggagccaaaccaacatgctcttctacagtcttctcaccatccctagactgagcaaa
gcagacagaggactttacaaatgccatgtaacaagtggtccatctaagcgagaaacaaat
accacagttattgtctatgaccagccgttcattcgactcaagcacagagatggccctgtg
gttcaggcttctgcaggacagaaatctttccgtcttactccaaaactgagggctttccct
gcacctgaagtcatctggttgaaggatgggatgatcgccgccgagcggtgctcccggtac
catgtagatgggttttctctggtcattcgggatgttgcagaagaagatgctggaatctac
accatccttactggcatccagcagtatggactttatcagaacctcacactcacgttggtg
gtaaatgtgaagccacagattggagaaaagacagtttcctctcagcaagccgggactgtc
cagcgaggcagcagacaagcccttcactgcacctctcacggtgtcccaccacctcaaata
caatggctctggcatccatgtcctccgaaaggcctatgcgagaagcctcctccttcgtcc
tggactgcagtcagcgagaagacagaagtcacgtccacccacaatcccatcctgaccgtc
agctacagacaggaagtgttagaagggaagaataagactgtaggagttctgacagttggc
gaagcattgatatctggcatctatcgctgtgttgcatcaaacttaatgggcagagatgaa
ctagacatcagtttctatgtcacagatgtcaaaggaggcctaatcgtgtctttggaggaa
gagcccagagagggaggggacctccatctggtctgtatagccaataggcacctctattca
gacctgtcatggtatagatttacgaatcaatccaccacatcagagggagcttcagatctc
cgcggggagctcaaagaggggcagttctctcacactctggagcttctgctgaagaatgtg
actgcacaggattcgggaacataccgctgttcagccacacacctgcttacaggagaacat
acccacctagatacaaccgtggaggtcacagttctgcaggcaccggtgctgctgcgaaat
ctgagtgatcacagtgttaacgtaagcaaatcagtcactctccgctgcccctctcgggga
attccacacccccagatcacatggtataaggaccagagaaagctgcaacaggtgtctggt
attatgctgttcccagaggaagggactcttcatatcgaccgaattacagttgaagaccag
ggactttacacctgtaaggccaccaatgagagagggtctgtggagagctccgcccacatt
tgggttcaaagttcatctgaatcactttccctggagatcccgactctagcatgtacatgc
gtggtggccactctcttctggcttcttctcacactgctgattcgcaaactcaaacagccg
aactccactaatggcaaagcagagtacctgccaatcatcctgcatccgggggatgaacat
ctggtggagaactgcgacagattacagtatgatcccgcccaatgggagtttccacgtgac
cgccttcaacttgaaaagcccctggggcgaggggcatttggccgagtaatgcaggcctca
gcttttggcatttgcagttcagccagctgcaccacagtggccgtcaaaatgcttaaagat
ggcgctacgcccagtgaacacaaggctctgatgacagaactgaagatcctcaatcatatt
ggtcatcacctcaatgtggtcaatcttcttggtgcatgtaccaaaccaggagggcctctg
atgatcatagttgaatactgcaagtttggcaacctgtctgcgtaccttaagagcaaacga
gaagtgttcctgttgaacagggtgagcagagaagaggagggaggcatgaaggagggattt
aaagcacgattaactagtgtgtccagcagccagagcaatgccagctcagggtttagtgag
gagaaaggagaaatctcagaggaggacagcggttcacttcctgaatccaacagccctctg
ctgcttgaagacctgatctcttacagctttcaggtggccagaggaatggagtttctcgcc
tctcgtaagtgcatccatcgtgaccttgctgccagaaacatcctgctgtccaacaacaac
gtggtgaagatctgtgattttggcttggcccgagacgtatacaaagacccagactatgtg
cgcaagggagatgcacggttaccactgaaatggatggcacctgaatcgatcttcgacaaa
gtcttcaccgctcagagtgacgtgtggtcatatggagttctgctctgggagatcttctca
cttggagcgtctccatacccagggctgaacattgatgaggcgttttgtcacagactgaag
caggggactcggatgtgtcctcctgagtacagcaccccggagatttacagcattatgatg
gcatgctgggaaaataaccctgaggacagaccttctttctctgctcttgtggagatactg
ggagacctccttcagacctgtgtccaacaggatggaaaggattatattccactgaatgct
tttatttctggagaaggaaataccgtcacgccgcacatcgtccagaaagacataagccag
aaatcactgggaacttcaagctacagcagctctgggaaaatcaaagccatcagcactttt
gaggatctacacaaagaaatccctgatgacaaccagtctgacagtggaatggttctcccg
tctgaagagctgattcgggtgaagtggacggacagatttaaaacccaaaacatcactaag
ttcttctctaaaggtgaaaaccagcacatgaagctgccttgtatgaatagcgccccctgt
tgtcatcagagggaggttcctccggtgtgttcctcagagaggtgctgctctcccccgcca
gactatgaagctgctctcctctacccctgtttctaa
DBGET
integrated database retrieval system
