Carassius auratus (goldfish): 113043271
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Entry
113043271 CDS
T07313
Symbol
tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113043271 (tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113043271 (tdg)
Enzymes [BR:
caua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
113043271 (tdg)
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113043271 (tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
113043271
NCBI-ProteinID:
XP_026058303
Ensembl:
ENSCARG00000011739
UniProt:
A0A6P6JEN1
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All DBs
Position
25:complement(11029142..11034051)
Genome browser
AA seq
432 aa
AA seq
DB search
MDERLYGSLPHAPSEYLQQWVQSAQQHLQTLQAQYPHMANGNAGFMMEGRREDGGMQQMP
VHPEDAAQLEPAAAQKAPAKGKRGRPASKEPKAKAKPGPKPKKAKEAPSAEGQEKIDETF
KKVKRKVDRFKGMSEEEVMKKTLPDILIPNLDYVIIGINPGLMAAYIGRWFPGPGNHFWK
CLFLSGFTEKLLNHMDDQSLPEKYSIGFTNMVARATPGSKDLSSKELREGGKILVEKIKK
FKPLIAVFNGKCIYEMFCREIFGKKPKTLEFGLQPHRVPDSETALYLMPSSSARCAQFPR
AQDKVHFYIKLRELRDQLKGVAKPKEIEEVNYSFDLGLAKEDAKRMAIKEEQYDPGYETA
FGGAYGELAPEGGQSNGYCSFSTSEEKADTVEKAPTDPNAVGQVQDGQWMTQSFADQIPA
IGSSSQAQSWGV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaggctctatggatctttgcctcatgccccctcggaatacctccaacaatgg
gttcagtcagctcagcagcatctgcagacccttcaggctcagtatcctcacatggctaac
ggtaatgctggttttatgatggagggacgcagagaagatggaggcatgcagcagatgcct
gtacacccagaggatgccgcccaactggagcctgcggctgcacagaaagcgcctgctaaa
ggaaagcgaggaaggccagcgagcaaagaacctaaagccaaagccaaacctggacccaaa
cccaaaaaagccaaggaggccccatcagctgaaggacaggagaagattgacgaaaccttc
aagaaagtcaagaggaaagtcgatcgctttaagggcatgtcggaggaggaagtcatgaag
aaaacactgcctgacattcttatccccaatctggactatgtcattatcggaattaatcca
gggttgatggcggcctacattggaagatggtttcctggaccaggaaaccatttttggaag
tgtctgttcctgtctggattcacagagaagctgctaaatcacatggatgatcagagtttg
cctgagaaatacagcatcggcttcacaaatatggtagcgagggcgacaccgggaagcaaa
gatctctctagcaaggagcttcgagaaggtggtaaaatcttagtggaaaagataaagaaa
ttcaagccactcatagcagtttttaatggaaaatgtatatatgaaatgttctgtagggag
atatttgggaagaagccaaaaacacttgaatttggcctacagcctcacagggttcctgac
tctgagacggcgttgtacctgatgccctcctccagcgcccgctgtgctcagttcccacgt
gctcaggacaaagtgcatttttacatcaagctgagagagctccgagatcagctgaagggt
gttgcgaagcccaaggagatcgaagaagtcaactactcatttgatctcggcctggccaaa
gaggacgctaagaggatggccatcaaggaagagcagtatgatcctggttatgagaccgct
ttcggaggagcatatggagaactcgcacctgaaggaggccaaagcaatggatattgtagc
ttctccacatctgaggagaaagctgacacagtggagaaggcgcctacggatccaaacgcg
gtcggacaggttcaggacggtcagtggatgacgcagtcttttgccgatcagatcccagcc
atcggcagctcctctcaagcccaaagctggggtgtatga
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