Carassius auratus (goldfish): 113043272
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Entry
113043272 CDS
T07313
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113043272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113043272
Enzymes [BR:
caua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
113043272
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113043272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
113043272
NCBI-ProteinID:
XP_026058309
Ensembl:
ENSCARG00000011752
UniProt:
A0A6P6JCZ0
LinkDB
All DBs
Position
25:complement(11034310..11039124)
Genome browser
AA seq
404 aa
AA seq
DB search
MAVRPPVKMEERQYSSLTADMDYLQYWYQTNTQQYQAEQVPQYHQMLNAVQYTERPVEDK
IMTDLSVHQDPYPDQPQQHHQLSAQPPALPTTPAKGKKRGRPPKGEGKERTEAEESAKKA
KRTLDRFNGMSVEEVMAKKLPDIITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLF
LSGLTDEQLNHMHDQTLPERYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQMYRP
LIAVFNGKCIYETFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQD
KVHFFIKLKELRDQMKGVVKTQEIQETSYTFDLPLAKEDAKRQSIKEEQHDPGYEETCAH
GSQQHTPQAFGVHPSTDTDQVPDNRWTMQPFADQIPDIRCSNSN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagaccaccagttaagatggaagaaaggcagtattcatctctgacggccgat
atggattatcttcagtactggtatcaaaccaatactcagcagtaccaggcagagcaggtg
ccacagtaccaccagatgcttaatgccgtccaatacacagagagacctgtggaggacaaa
atcatgactgatctttcagtgcatcaagatccatatccggatcaacctcaacagcatcat
caactctctgcccaaccaccagcccttccgacgactccagcaaaaggaaagaaaagggga
aggcctccaaaaggtgaaggaaaggagaggactgaagctgaagagtctgccaagaaagca
aaaaggacgctagatcggttcaacgggatgtcagtggaggaagtcatggctaaaaagctt
ccagacatcatcacacataatcttgacatgctgattattggcatcaatcctggactcttg
tcagcctacaagggaaggcattatccaaatcctgggaaccacttttggaaatgcctgttt
ctttctgggctgactgatgaacagctaaaccacatgcatgatcagacgcttcctgaacgc
tatggcattggtttcacaaatatggtggagaggacaacacctgggagtaaagacctatca
aacaaagagatccgtgaaggtggccaccagcttctggaaaagctccagatgtacagacct
ttaatcgctgtgttcaatggaaaatgtatttatgaaacattttgcaaggagattttcgga
gtaaaggcaaagaacttagagttcggattgcagccttacaaagtgccggaaactgagacg
gtttgctatctgatgccatcatcaagcccacgctgtgcccagtttcctcgtgctcaggac
aaagtgcacttcttcatcaagttaaaggagctcagggatcagatgaagggagtggtgaag
actcaagagatccaagagacaagctacacatttgatctgcctctggccaaagaggatgcc
aaaagacagtcaatcaaagaagagcagcatgaccctggatatgaggagacttgtgcccat
ggatcacagcagcacacaccgcaagcatttggggtccatccttcgacagacacagaccag
gtaccggacaaccgttggacaatgcagccgtttgcagaccagattccagacatcagatgt
agcaacagcaactga
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