Carassius auratus (goldfish): 113043519
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Entry
113043519 CDS
T07313
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113043519 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113043519 (eftud2)
Spliceosome [BR:
caua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113043519 (eftud2)
Complex C
U5 SnRNP specific factors
113043519 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
113043519
NCBI-ProteinID:
XP_026058752
Ensembl:
ENSCARG00000008689
UniProt:
A0A6P6JGI0
LinkDB
All DBs
Position
3:3469939..3480575
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AA seq
973 aa
AA seq
DB search
METDLYDEFGNYIGPELDSDEDEEVDAEDRDADEADEDDDDEDQAEADEEEGGGGMEVVL
HEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKMKKFTLMEQELPVTVYDMEFL
ADLMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDSDLRYTDILFTEQERGV
GIKSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSVRLSDGIVLFIDAAEGVMLNT
ERLIKHAVQEKLAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDESLI
VSPLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYMEFAKRLWGDIYFNPKTRKFTKK
APNSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLV
CNRFFGEFTGFVDMCVQHIPSPQGGAKAKIEHSYTGGLDSDLGETMSECDPDGPLMCHTT
KMYSTDDGVQFHAFGRVLSGTLQAGQPVKVLGENYSLEDEEDSQICTIGRLWISVARYQI
EVNRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPV
VTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQ
TKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPL
CDEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAP
ADCVSAVYTVLARRRGHVTQDAPIPGSPLYAIKAFIPAIDSFGFETDLRTHTQGQAFALS
VFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLL
ELAKQDVVLNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatctttatgatgagttcggaaactacattggaccggagctggactctgat
gaagatgaggaagtagatgcagaggaccgggatgctgatgaggcggatgaggatgatgat
gatgaagaccaggctgaggctgatgaggaggagggtggtggtggtatggaggtggttctg
catgaagataaaaaatattatcccacggctgaggaagtttatggtcctgaggtggagact
atcgtccaagaagaagatacacagccattgacggagcccatcatcaaacccgtgaagatg
aagaagtttactctgatggagcaagagcttcccgtcaccgtctatgacatggagttcctc
gctgatttgatggacagctcagaactgatcagaaatgtcaccttgtgtggacacttacac
catggcaagacttgctttgtggactgcctcattgaacagacacatcctgaaatccgtaag
agagatgactctgatttacgatacacagatatcctcttcacagagcaagagaggggagtt
ggcatcaagagtacacctgtaaccatggtgctgcctgactctcggggcaaatcctacctc
ttcaacatcatggacacgccaggtcatgtgaatttctctgatgaggtgacatcatcagtc
agactgtctgacggcattgtgctttttatcgatgctgctgagggggtgatgctaaacact
gagcgactgatcaagcatgcagtgcaggagaagttggccatcactatctgtattaataaa
gtggatcgtctgattgtggagctgaagctgccccctactgatgcctactacaaactgcgc
cacattgtggatgaggtcaatggcttgctgagcacatactccacagatgagtctctgatt
gtgtctcccctgttggggaacgtgtgtttcgcttcctcacaatacagcatctgcttcact
cttggctcctttgccaagatctattcagacacttatggcgacatcaactacatggagttt
gccaaaagactgtggggagacatttacttcaaccctaaaacgaggaaattcacaaagaaa
gcccccaacagcaactctcagcgcagctttgttgaattcgttctggagccgctgtacaag
attctttctcaggtggtgggggatgtggatacgtctctgcctcgtgtcttggatgagctc
ggcattcacctgactaaagaggagttgaagctaaacatcagacctctgctgcgccttgtt
tgtaaccgcttttttggagagtttacaggctttgtggacatgtgcgtgcaacacatacca
tctcctcagggtggtgccaaagccaagatagagcacagctacacgggtggactggactcg
gacctcggagagacaatgtctgagtgtgaccctgatggtccactgatgtgccacaccact
aagatgtacagcacagatgacggggttcagttccacgcgttcggtcgagtcctgagtgga
accctgcaggcgggacagccggtgaaggttctgggagagaactacagcctggaggatgag
gaggactctcagatctgcacgatcggacgtctgtggatttctgtggctaggtatcagatt
gaagtgaatcgtgtccctgctggtaactgggtgttgatcgaagggtgcgaccagccaatt
gtcaaaacagccacaatcacagagccccgtggaaatgaagaggctcagatcttcaggccg
ttgaagtttaacaccgcatcagtgataaaaatcgctgtggagccagtcaatccctcagaa
ctgcccaagatgttggatggactcagaaaagtcaacaagagttatccatcactcacaaca
aaggtggaggagtcaggtgaacatgtgattcttggtacaggtgagctgtacctggactgt
gtaatgcacgacctgaggaagatgtactctgagatcgatatcaaggtggctgatccagtg
gtgaccttctgtgagactgtggtagagacgtcctccctgaagtgttttgcggaaacgccc
aataaaaagaataagattaccatgattgctgagccattggagaagggtctggccgaagac
attgagaacgaggtggtgcagatcacatggaacagaaagaagttgggagagtttttccag
acaaagtatgactgggatttgctggcagctcgttcaatttgggcttttggacctgacaca
accgggcccaatattttagtagatgacactctgccctctgaggtagataaagctcttctc
ggctcagtgaaggacagcattgtacagggcttccagtggggcacacgcgagggtcctttg
tgtgatgaaccaatccgcaacgtgaagtttaagatcctggacgcagtgatcgcacaggag
ccgctgcacaggggaggaggacaggtcatccctacagctcgtagagtcgtctactctgcc
ttcctgatggccacgcccaggctgatggagccctattactttgtggaggttcaggcccct
gctgactgcgtttctgctgtgtacacggtgctggcgcgcaggagaggtcatgtgacgcag
gatgctccaatccctggctctcctctctacgccatcaaggctttcattcccgctattgac
tcgtttggctttgaaactgatctccgcacacacacgcagggccaggccttcgcactcagt
gtgttccaccactggcagattgttccgggtgatcctctggacaagagcattgtgattcgt
cctctagagcctcagccggcccctcatctggccagagagtttatgatcaaaacccgcagg
cgcaaaggcttgagcgaggacgtcagtatcagcaagttcttcgacgaccctatgttgttg
gagctggccaaacaagatgtggtgctcaactacccgatgtga
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