Carassius auratus (goldfish): 113045372
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Entry
113045372 CDS
T07313
Name
(RefSeq) uncharacterized protein LOC113045372
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113045372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113045372
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113045372
Membrane trafficking [BR:
caua04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
113045372
Pattern recognition receptors [BR:
caua04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113045372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
zf-C3HC4_4
CARD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
NOD2_WH
zf-C3HC4_3
RING_XB3-XBAT31
nSTAND3
AAA_16
AAA_25
zf-RING_2
FISNA
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113045372
NCBI-ProteinID:
XP_026061507
UniProt:
A0A6P6JQG9
LinkDB
All DBs
Position
27:complement(9028764..9058884)
Genome browser
AA seq
2446 aa
AA seq
DB search
MAEASISWDEDRVICTICLDLLKDPVTIPCGHSYCMKCITGYWDHDDQKRVYSCPQCRQT
FTPSPLLGKDKRTEKQKKEKGPTYWICLAASYDLDYGEIEAFKGYLQPRLTRDDLQRQVM
KIYGRGQSNMICWYKSSVFDKSKLVAECNLDERVYLAACYTEPVIIQKSKEQTEKYYLEH
VRSVDASSHLLSNDKNHSIRIDQLFSPDSDENTPKTVILSGDSGRGKSFTLQKIMLDWAS
GVLYSENFDVVFLLKFEELKCIFEEMSLFELLSWSCSLKSYQISQILQLTTPEKVLFLID
GIDEYVSHPPSHSMLVLTNPSHRARPMDILRSVLKGILLPESFILVTTRSRAADAVMNLL
KGPQRFTEIMGFSERGVQEYFQMFFQDEQIFRKMYERVKMNENLLTACSVPLLCWMVCFC
LKKHLTDDDGVMRELKTNTSIYVHFVSTLLEHHDQSQSVLTMLRSLGQLAERGIQNQQVF
FDEKSVAKTGLDSATNLFLYKGDLREKHEPVYKFIHFSFQEFFAALNYVLLDEDVSWWKV
RELFKLMESEALICWSSPVLRGRLSNPIPSVMMFLCGLLNEKVSSSIFQKIRLTVPHTMK
LKKRELKKKLMKRITAMTRQYGFELFALHCLYEFKDERFVMKALKTHNLMDLSNITLRST
DCWVLLYCLQCCPNIRYLNLMYCDLTAEKLKILQPALCISKTMRLSVEHLSEVEDLIQVL
GESKILRELKVQEDENSAEGPRWSLNLSVNRGDVLLSLSSSEKNLSFPAVLNISLTCPQS
ELSSTDWTFFLQRLSKTAKVAEDSSALDEHVSLLLSSFHSVGLTMLDLKLVSLNESWASG
IIWLVRTCTSLQQLSVFADLLLEEGIMLLNKSLTDPHCTVIIEGRKGRKPTDQCKELDCS
HSCYDKVKIHFKPKVLEQLKKLDIFDSEQSGLNLQPLPVCQSCVHIVDSDQWVQVEPSVC
TDEGGSEFRISTPAGRFECRRTRMRWVCAGDITLQYRAVDGGFLSEELERLQCERIGPVI
DVTVISGKLEEAHLPHYACLAESYSSLKYAVKVLGILESVELTCFHAKIIQPSFWPTTVI
KQKDIPIEQHLDLLIFMTSEDPLILSVYILPLFDTFSKEKIKHEETANNPHVLEIEHSNP
SLKIQMDTPHVLKVSGASVDSEEGITFLSSSHPVVFKIKQDIDGDVQMTLIKQQHEMFVW
KTVICKDKLNQKKKEMRNLMARFGRLSTEMRKHIPEGQKQKPRKRRSDIILLYKASVIDK
RKFVTECNLQTDECVELAARYTEPVIIQKSKEQNEKYYREHVRSAHASGLNTSTHLLSND
KNHSIRIDQLFSPDSDGNTQKTVILSGDSGRGKSFTLQKIMLDWASGELNSKSFDVVFLF
KCEELKCIFEEMSLFELLSWSCSLTLDQISQILELTTPEKVLFLIDGIDEYISHPPSHSM
LVLTNPSHRARPMDILRSVLKGILLPESFILVTTRSRAADAVMNLLKGPQRFTEIMGFSE
RGVQEYFQKFFQDEQLFRKMYERVKINENLLTACSVPLLCWMVCFCLKKHLTDDDRVMRE
LKTSTSIYVHFVSTLLEHHDQSQSVLTMLRSLGHRAEEGVKKREGLFVEKSVTATGLDPA
TNVFLYKDSLKRNNRQVSVFKFMHLSFQEFFTALYYVLLDKKESWEKVTDLLNSLKMKGI
INRPSPERRSNPIPSVMMFLCGLLNEKTSSSLFVMIKWTVPQIIKLKTNLQESLLTVRRQ
HGCELFALRCLYELQDEKAVRRALGDWVSINLYSVPLRSTDCWVLLYCLQCCPNIRYLNL
MYCDLTAEKLKILQPALCMCENLRLSVKHLSEFGDLIQVLGKSKFLKKMRIQESENSAEN
PRWSLELSVTRGDVLLSLSSSEKNLSFPGVLNFTLTCPQSELSSTDWTLFLQRLSKTEKV
AEDSSALDEHVSLLLSSFHSVGLKTLNLKLVSLNESWASGIIFLSQTCTSLQELRVSVTG
LLLEDELTLLKKSLTEPHCTVIIEGRKCSKLTDQCKEQDWSHSCNEKVEIHFKPKVLKNL
KEPTISYSELSGLNLQPLPVCQSCVHIVDSDQWVQVEPSVCTDEGGSEFRISTPAGRFEC
SRTRMRWICAGDITLQYRAVDGGFLSEELERLQCERIGPVIDVTVISGKLEEAHLPHYAC
LAESDPSLTQSVKVLSVEDEGISLESVELTRFHAKILKPSFSPKTMLMKLGISVKVHCDL
LIFMTQKNPIILHVYFFPSDSLFKEKIKSEEKLSHPIKCSRPETPLRMMKQHSLDVHGAS
VQPEAIKLRGDIEPNFFQVKHPVDNDIKMSLSQVDDQKSVWTATVWKELINMHPNRAENL
FQTGQNQNTPRLAVNFDKVQFFDRNWCALIRSVENVNNIADNLLQKQIIHEELYSEITHP
TSTSEASMRKICSIVRKGSDTVKEMFICILLEEDPNLLNHLPLPDF
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtatttcatgggatgaggatcgggtcatctgtacaatctgtctggat
ctactgaaggatccagtgaccattccctgtggacacagctactgtatgaagtgtattaca
ggttactgggatcacgatgatcagaagagagtctacagctgccctcaatgcagacaaacc
ttcactccaagccctttgttaggtaaagacaagaggactgaaaaacagaaaaaagaaaaa
ggacctacttattggatatgcttggcagcttcttatgatctggactatggtgaaattgaa
gcgttcaagggttacttacaacctagacttacaagagatgacctacaaagacaggtgatg
aaaatatatggaagaggacagagcaacatgatttgttggtacaagtcttcagtctttgac
aaatctaagttagtggcagagtgtaatcttgatgaacgtgtgtatctggccgcctgttat
actgaaccagtgatcattcagaagagcaaagagcagactgagaaatactatcttgaacat
gtgaggtctgtggatgcttcatctcatctgttatcaaatgataagaatcacagcatcaga
atagaccagctgttcagtcctgacagtgatgaaaacacaccgaaaactgtgattctcagt
ggagattctggaagagggaaatccttcacgctacagaagatcatgttggactgggcttct
ggagtactttactctgaaaactttgatgtagtttttcttctgaagtttgaagagctgaag
tgtatttttgaggagatgagcttatttgagcttttgagctggagttgcagcttaaaatcg
tatcagatctcacagatactgcagttaacaacaccagagaaagtcctcttcctcattgat
gggattgatgaatatgtttctcatccacccagtcattcgatgttagtactcactaatcca
tctcatagagcccgacccatggacattcttaggagcgtgttaaagggaatcttgttgcct
gagtcattcattcttgtcaccacaagatctcgagctgctgatgcagtgatgaacctcctc
aagggtcctcagcgtttcactgagattatgggcttctctgagagaggggtgcaggagtac
ttccagatgttctttcaggatgaacagatcttcaggaaaatgtatgagagagtgaagatg
aatgaaaacctcctgactgcctgctctgtgcctttgctgtgttggatggtctgtttttgt
ctgaagaaacacttaacagatgatgatggtgtgatgagagaactaaagacaaacacctcc
atatatgtgcactttgtgtccactctactggagcatcatgaccagagtcagtctgtcctc
accatgctgaggagtctgggtcagctggcagagagaggaatacaaaatcaacaagtcttt
tttgatgaaaagagtgtagccaagactggcttagattcagctactaatttgttcttatat
aaaggtgaccttagagaaaaacatgaaccagtttataagtttatccatttcagctttcag
gagttcttcgctgcgcttaattatgtgttgttagatgaagatgtgtcctggtggaaagtc
agggagctgtttaaattgatggaatcagaagctttaatttgctggtcatctcctgttttg
agaggtagactatcaaatcccatcccttcagtcatgatgtttctctgtggtctcttaaat
gagaaggtgagcagctcaatctttcaaaagatcaggttaactgttcctcacaccatgaaa
ctgaaaaaaagggaactaaagaaaaagttgatgaaaaggattactgcaatgacacggcag
tatggatttgagctgtttgctctccactgtctgtatgagttcaaggatgagagatttgtc
atgaaagctcttaaaacacacaacctcatggatctgtctaacattactctgaggagcaca
gattgctgggtgctgctgtactgtcttcagtgctgtccaaacatcagatacctgaacctc
atgtactgtgatttaacagctgagaaactcaagattcttcagccagcgctctgtatctct
aagactatgaggctgtcagtggagcacctgtcagaagttgaagatttgatccaggttctt
ggggaatcaaaaatcctgagagaactgaaagttcaggaggatgagaacagtgctgagggt
cccagatggtcacttaacctatcagtcaatcgtggagatgtcttgttgtctttgagctcc
tctgagaagaatctgtcatttccagcagtcttgaacatcagtcttacatgtccacaatca
gagttatccagcactgactggacattcttcttacagagactcagcaagacagcaaaagta
gctgaagattcttcagctcttgatgagcatgtcagtttgttgctgtcttcatttcactct
gtgggtttgacgatgttggatctaaagctggtcagtctgaatgaaagctgggcttctggg
atcatttggctcgtccggacctgcacaagtctgcagcagctcagtgtctttgctgatttg
ctgttagaagagggaatcatgttgctgaacaaatcactgacagatccacactgcactgtg
atcattgaagggaggaagggcaggaaacccactgaccagtgcaaagaactggactgcagt
cacagctgttacgacaaagtgaaaattcatttcaaaccgaaagttttggaacagctgaag
aagttggacatctttgactcagaacaatctggactgaatcttcagccgctcccagtgtgt
cagtcttgtgttcacattgttgactctgatcagtgggttcaggtggagccgtcagtctgt
acagatgaaggagggtcagagttcaggatcagcactccggcaggtcgattcgagtgcaga
aggaccagaatgcgatgggtctgtgctggtgacatcactctccagtatcgtgcagtggat
ggaggtttcctcagtgaagagctggagaggcttcagtgtgagagaattggtcctgtgatt
gatgtgacggtgatctcagggaaactggaggaggcacatctacctcattacgcctgttta
gcagagtcatactcctctctcaaatatgctgtaaaagtccttggaatcttggaatcggtg
gagctgacttgttttcatgccaaaataatccagccatccttttggcctaccacagttatt
aaacaaaaagacatccctattgaacaacatttagatcttcttatcttcatgacaagcgaa
gatcctcttattctcagtgtctacattcttccactgtttgatacattttcaaaggaaaaa
attaagcatgaagaaacagctaataatcctcatgtccttgaaattgagcactctaaccct
agcttgaaaattcaaatggacacaccacatgttcttaaagtatccggtgccagcgtagat
tccgaagaagggattacatttttaagcagtagtcacccagtcgtcttcaaaatcaaacaa
gacatagatggggacgttcagatgactctcatcaaacagcagcatgaaatgtttgtgtgg
aaaacagtcatttgcaaagacaaacttaatcagaaaaaaaaagaaatgagaaatttaatg
gccaggtttggcaggttgtccacagaaatgagaaagcacatccctgaaggacagaagcag
aagccacggaaacgtaggagtgacataattcttctctataaagcatcagtaattgataaa
cgtaagtttgtgaccgagtgtaatcttcaaactgatgaatgtgtggagctggctgcccgt
tacactgaaccagtgatcattcagaagagcaaagagcagaatgagaaatactatcgtgag
catgtgaggtctgcacatgcttctggactgaatacatctactcatctgttatcaaatgat
aagaatcacagcatcagaatagaccagctgttcagtcctgacagtgatggaaacacacag
aaaactgtgattctcagtggagattctggaagagggaaatccttcacgttacagaagatc
atgttggactgggcttctggagaacttaactctaaaagctttgatgtagtttttttgttt
aagtgtgaagagctgaagtgtatttttgaggagatgagcttgtttgagcttttgagctgg
agttgcagtttaacattagatcagatctcacagatactggagttaacaacaccagagaaa
gtcctcttcctcattgatggaattgatgaatatatttctcatccacccagtcattcgatg
ttagtactcactaatccatctcatagagcccgacccatggacattcttaggagcgtgtta
aagggaatcttgttgcctgagtcattcattcttgtcaccacaagatctcgagctgctgat
gcagtgatgaacctcctcaagggtcctcagcgtttcactgagattatgggcttctctgag
agaggggtgcaggagtacttccagaagttctttcaggatgaacagctcttcaggaaaatg
tatgagagagtgaagataaatgaaaacctcctgactgcctgctctgtgcctttgctgtgt
tggatggtctgtttttgtctgaagaaacacttaacagatgatgatcgtgtgatgagagaa
ctaaagacaagcacctccatatatgtgcactttgtgtccactctactggagcatcatgac
cagagtcagtctgtcctcaccatgctgaggagtctgggtcatcgggcagaggaaggggtg
aagaagcgagaaggtctttttgtagagaagagtgtgactgcgactggcttagatcctgct
actaatgtgttcttgtataaagatagtttgaaaagaaataacagacaggtgtcagtgttc
aagttcatgcatctcagcttccaggagtttttcactgctctttattatgttttactggat
aaaaaagagtcctgggagaaagtcacagatctgttgaactccctgaaaatgaagggtata
atcaataggccttctccagaaagaagatcaaatcccatcccttcagtcatgatgtttctc
tgtggtctcttaaatgagaagacgagcagctcactctttgtaatgatcaagtggactgtt
cctcaaatcataaaactaaagacaaacctgcaggaaagtcttcttacagtgaggagacag
catggatgtgaactgtttgctctgcgctgtctgtatgagctccaggatgagaaagctgtg
aggagagctttaggagactgggtatccatcaatctgtatagcgttcccctgaggagcaca
gattgctgggtgctgctgtactgtcttcagtgctgtccaaacatcagatacctgaacctc
atgtactgtgatttaacagctgagaaactcaagattcttcagccagcgctctgtatgtgt
gagaatctgaggttgtcagtaaagcacctgtcagaatttggagatttgatccaggttctt
ggtaaatctaagttcctgaaaaaaatgaggattcaggaaagtgagaacagtgctgagaat
cccagatggtcacttgagctgtcagtgactcgtggagatgttctgttgtctttgagctcc
tcagaaaagaatctatcgtttccaggagtcttaaacttcacacttacatgtccacaatca
gagttatccagcactgactggacactcttcttacagagactcagcaagacagaaaaagta
gcagaagattcttcagctcttgatgagcatgtcagtttgttgctgtcttcatttcactct
gtgggtttgaagacgttgaatctgaagctggtcagtctgaatgagagctgggcttctggg
attattttcctttcccagacctgcaccagtctacaggaactcagagtcagtgtcactgga
ttgcttttggaggacgagctcacgttactgaagaaatcactgacagagccacactgcact
gtgatcatcgaagggagaaaatgcagtaaactcactgatcagtgcaaagaacaggactgg
agtcacagctgtaatgagaaagtagagattcacttcaaaccaaaggttttgaaaaacctt
aaagagccgaccatctcttactcagaactgtctggactgaatcttcagccgctcccagtg
tgtcagtcttgtgttcacattgttgactctgatcagtgggttcaggtggagccgtcagtc
tgtacagatgaaggagggtcagagttcaggatcagcactccggcgggtcgattcgagtgc
agcaggaccagaatgcgatggatctgtgctggtgacatcactctccagtatcgtgcagtg
gatggaggtttcctcagtgaagagctggagaggcttcagtgtgagagaattggtcctgtg
attgatgtaacagtgatctcagggaaactggaggaggcccatctacctcattatgcctgt
ttggcagagtcagacccctctctcacacaaagtgtaaaggtcctcagtgttgaagatgag
ggaatatccttggaatcagtggagttgactcgttttcatgccaaaatacttaaaccatct
ttttctcctaaaacgatgcttatgaaactagggatatcagtaaaagtgcactgtgatcta
ctgatcttcatgacacaaaagaaccccattattctccatgtgtattttttcccatcagat
tcactttttaaagaaaaaattaaatcagaggaaaaactgagtcatccaatcaagtgttca
agacctgaaactccactgcgtatgatgaaacaacacagtcttgatgttcatggtgcatct
gtccaacctgaagcaatcaaattaagaggagacatcgagccaaacttctttcaggtcaaa
catcctgtggacaatgacatcaaaatgtcactcagccaagttgatgatcagaaatcagtt
tggactgcaacagtttggaaagaattaatcaacatgcatccaaacagggctgagaatttg
tttcaaacaggacaaaaccaaaatacaccacgattggctgtcaactttgataaagttcag
ttttttgatagaaattggtgtgctcttattagaagtgttgagaatgtaaataacattgca
gacaatctgctgcaaaagcaaatcattcatgaagaattatattctgaaatcacacatcca
acttcaaccagtgaagccagcatgaggaagatctgcagcatagtgcgtaaaggtagtgac
actgtgaaagaaatgttcatctgcattcttctggaagaagatcccaatcttttaaatcat
ctgcctttacccgacttttaa
DBGET
integrated database retrieval system
