Carassius auratus (goldfish): 113046672
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Entry
113046672 CDS
T07313
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03272
Virion - Hepatitis viruses
caua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
113046672
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113046672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113046672
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113046672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
EGF_LRP2
EGF_3
Psg1
TMEM154
TMEM252
Motif
Other DBs
NCBI-GeneID:
113046672
NCBI-ProteinID:
XP_026063345
Ensembl:
ENSCARG00000017938
UniProt:
A0A6P6JUQ0
LinkDB
All DBs
Position
28:8223260..8235993
Genome browser
AA seq
856 aa
AA seq
DB search
MESSLILLLAVTFFSPVHTGALTCEPRQYQCGNGKCITARWVCDETDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCVPKSWKCDGKADCENSADEEGCDPRRCLNGEFRCGSGQCVT
AAFVCDEERDCDDGSDEVSCPPTTCSSNSFRCNNAQCVPRLWVCDGDADCADGSDELPQK
CSTGTPRPTKNPCSSMEFHCGSGECIHSSWKCDGGEDCLDRSDEKNCSVSTCRPDEFQCG
DGSCIHGSRQCNLVYDCKDLSDELGCVNATHCEPPHRFKCRSGECISMENVCNKKRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFWLVDKRRCEDIDECANPDTC
SQICVNLMGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRVIP
RLKNVVALDMNVASREIYWSDLSLKKIYRAPMDTADNSSQHSVVIGSDLDAPEGIAVDWI
HGNIYWTDSIKGAISVATADGSRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTPAKIER
GGLNGGDRYALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSISVQGDGRRTLIIDQGK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGRDITNVAEHLSSPEDIVLYHNLKQPTGF
NWCRVNNGGCEFLCLAAPQINRLSPKYTCACPDNMMLARDMRKCVQAVVTPEPPVKPKIV
TTSHPKVPSKTTPNPAPSIPKQPTQPVPIKPSQSTTKLPLSNQTDDHQSNVKDVSQSSSS
TPLALYILLPLAILCLVVGGAVLFWRKWRQKNTNSIHFDNPVYQKTTEDQVHLCRNSSSD
GFLYPQRQVVSIDDEM
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcattaatacttttactggcggtcactttcttcagtcctgttcatacaggt
gctttgacttgtgaaccacggcagtatcagtgtggcaatggaaagtgtatcacagcgaga
tgggtgtgtgatgaaactgatgactgtggtgacggcactgatgaacttcctgctgcctgc
ttggccaagacctgcagacccagtgaattcagctgtggtgggcgactaaaccagtgcgtg
ccaaagagttggaagtgtgatggcaaagcggactgtgagaacagtgcggatgaggaaggc
tgtgatcctcgccggtgtctgaatggcgagtttcgctgcggcagcggccagtgtgtgact
gccgcatttgtgtgtgatgaagagagagactgcgatgatggcagtgatgaagtctcctgt
ccgcccaccacgtgtagctccaactccttcaggtgcaacaatgcacagtgtgtgcctcga
ctgtgggtctgtgatggagatgcagactgtgctgatggctcagacgaattgcctcagaaa
tgcagtacagggacgcctagacctaccaaaaacccctgctcctctatggaattccattgc
ggcagtggggaatgcatacacagtagctggaaatgcgacgggggagaagattgtttggat
cgctctgatgagaaaaactgctccgtgtccacatgccgaccggatgagttccaatgtggt
gacggatcttgcatccatggcagccggcagtgcaaccttgtatatgactgcaaggatttg
agtgatgagctgggttgtgtgaatgcaactcattgtgagccaccacacaggtttaaatgc
cgcagtggtgaatgcatcagcatggaaaacgtttgcaacaagaaacgggactgtagagat
tggtccgacgagccattgcgagaatgtgattctaacgagtgtctttacaacaacgggggc
tgctctcatatctgtaatgacctaaagattggttacgagtgcctctgtcccactggcttc
tggttggtggacaagagacgttgtgaggacattgatgagtgtgccaacccagacacctgc
agccaaatctgcgtcaacctgatgggtagttacaagtgtgagtgcgaggatggctaccag
atggacccagccagcaaggcttgcaaagctattggaaccatcgcctacctatttttcacc
aatcgccatgaggtcaggaagatgactctggatcgcagcgagtatacacgtgttattccc
cgcctgaagaacgttgtggcgctggatatgaatgttgcttccagggagatctactggtcg
gatttatccctcaaaaagatatatagagcaccaatggatacagcagataactcctcccaa
cacagtgttgtgattggcagtgatttagatgcacctgaaggtattgctgtcgactggatc
cacgggaacatctactggacagacagcattaaaggtgccatctctgtggcaacagcggac
ggaagcagacgcaagactctcttcaaagaaaacctggccaagccacgtgctattgtggtc
gaccctattaagaacttcatgttctggactgattggggcacaccagctaagatcgagaga
ggtggtcttaatggaggggaccgctatgccctagtcacagataacattgtctggcccaat
ggaataacccttgaccttttgaaccagcgtctgtactgggttgactccaaactacacact
ctctccagcatcagtgtgcagggagatggtcggcgtactctgatcattgaccagggcaaa
cttgcccatcctctgggtctcactgtgtttgaggagaaagtgttttggacagatgtgagc
aataatgcaattctaagtgcaaatcgtgtgactggaagagacatcacgaatgtggccgaa
cacctctcgtccccagaggacattgtcttgtaccacaacctcaagcaaccgactggattc
aactggtgcagggtcaacaacggtggctgtgaattcttgtgcctggctgcccctcaaatc
aatagactctcacccaaatacacttgtgcctgcccagacaacatgatgttggccagagac
atgcggaaatgtgttcaagctgtagtcacaccagaacctcctgtcaagcccaaaatagtt
acaactagtcatcctaaagtaccttcaaagacaacaccaaatcctgctccttcgatccct
aaacaacccactcaacctgttccaatcaagccatcccaaagcacaactaaacttccttta
tccaaccagacagatgaccaccagagtaatgtcaaagatgtgtctcaatcatcatcttcc
acaccgttggccttgtacattttgcttcctcttgcaatcctgtgtttggttgtgggtggt
gctgtgctgttctggagaaagtggcgtcagaaaaataccaacagcatccactttgacaac
ccagtttatcaaaagaccacagaggaccaggtgcatctatgcagaaacagtagttctgat
ggctttttgtacccgcagagacaggttgtgagtatcgatgatgaaatgtaa
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