Carassius auratus (goldfish): 113048008
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Entry
113048008 CDS
T07313
Name
(RefSeq) interferon regulatory factor 5-like
KO
K09446
interferon regulatory factor 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113048008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113048008
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113048008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
113048008
NCBI-ProteinID:
XP_026065284
Ensembl:
ENSCARG00000004302
UniProt:
A0A6P6JZK1
LinkDB
All DBs
Position
29:complement(9276161..9284184)
Genome browser
AA seq
508 aa
AA seq
DB search
MSGHPRRIRLKPWLLAQINSGKYPGLQWLNQERRLFRIPWRHATRHMPTLEEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFGLHYDGTKDTPVQPYKIYEVCDQSVNG
DAGDDEEEELQHFVKLSIDPSSYPAYPSRVDDPFNSTIADGYNPTHHNPPMNLLRDVVHN
NPSGGAPMSSHLSQPNTGPSAGAIKVEQASYPCGGLSNGLGMGTGVIPPPLLQDVVTHSV
GPQAMVDSPMQEVPVQAENQVHPCISELLSSPHMLPLTDLDIKFQYRGRTTGSLTVSNPQ
GCRLYYGNLAPTPEQVELFGPVTLQQVLFPGTAEIQNEKQRFYTDHLLDVMDRGLILEIR
GQDIYAIRLCQCKVFWSGPGVLEQGPPNPMEREMKIRVFSLNNFLHGLILYQKGEAPTPP
PFEIYFCFGEDWPDRKPKEKKLIVVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDLK
DQTVEQFKELHRLLQSQNAHHTWAQNIQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcatccacggaggatccgtctgaagccgtggctgctggcacagattaacagt
gggaaatacccaggactgcaatggctcaatcaagagcgcagactgttccggatcccttgg
agacatgccacccgccatatgcctaccctggaggaggagaacactatatttaaggcttgg
gctctcgaaacaggcaagtatcaggaaggagtagatgagccagatccagcaaaatggaaa
gccaatctccgctgtgccctaaacaaaagccgagagttcggactccactacgatggcact
aaggacaccccggtccagccttataagatctatgaggtgtgcgaccaatcagtcaatgga
gatgccggagacgatgaggaagaggagttgcagcactttgtcaaactctccattgaccct
tccagctacccagcatacccttctagagtagatgatccgtttaactctactattgctgat
ggctataatcccacccaccataaccctccgatgaacctcttaagagatgttgtccataat
aaccccagtggaggtgctcctatgtcctctcacctctcccagcccaacactggaccttcg
gctggtgcaatcaaagttgagcaggcatcatatccctgtgggggactttcgaacggtctg
ggaatggggactggagtcataccgccgcctcttcttcaagatgtagtcactcattctgta
ggccctcaagccatggtggacagcccaatgcaagaggtgccagttcaagcagagaaccag
gttcatccctgcatctcagagttgctgagcagtccgcacatgttacccttaactgatcta
gatatcaagttccagtacaggggtcggacaactggttctttaactgtcagcaaccctcag
ggttgtagactttactacggtaatctggcgcccacaccagagcaagtagagctatttggt
ccggtaacgctgcagcaggtgctgttcccaggaaccgctgagatccagaatgagaagcag
aggttctatacagatcatctgctggatgtgatggaccgagggctgattttggagatcaga
ggacaagatatctacgcaatcaggctgtgccagtgtaaagtgttctggtccgggccaggt
gtgctcgagcagggtccacccaatccaatggaaagagaaatgaagatcagggtcttcagt
ctgaacaactttcttcatggtctcattttgtatcagaaaggagaggcgcccactccacca
ccctttgagatctacttctgcttcggtgaggactggccagacaggaagcccaaggagaaa
aagctcatcgtagtccaggttgttccagttgttgcaagaatccttacagagatgttttca
ggcgagctttcgtggtccacagacagcattcggttgcagatctccaaccctgacctgaaa
gaccaaacggtggagcagttcaaagagctccacagactgttgcaaagtcaaaatgcgcac
cacacctgggctcaaaacatccaataa
DBGET
integrated database retrieval system
