Carassius auratus (goldfish): 113049280
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Entry
113049280 CDS
T07313
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113049280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113049280
Membrane trafficking [BR:
caua04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
113049280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
ERM_helical
Motif
Other DBs
NCBI-GeneID:
113049280
NCBI-ProteinID:
XP_026067279
UniProt:
A0A6P6K4X3
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Position
3:complement(18278708..18283678)
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AA seq
862 aa
AA seq
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MIGSPDVVAFTKEDDFGDSFSDPFSLPEEFSVPLFAHAANANPWTKTSYAKFSKDFILIS
EFSEQVGPQPLLTIPNDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPRLNFVEDS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADERKIMHQFQELSSEFSKASE
FLKSGNRKAFANELEKKLKDLEYTRSVLHKEAELQKMNNGCYSTQAIEKANELANMEKSI
YEHKDLLRQITSYPSRKKKDVHFVQRETEKLADTSVLDDTPNSNPSEIADKTVETENDIR
KSSYTPQLIKGKSAKCFDKRLKTMEELCDASFFHQTLEQLNIIEKSFRGDLCFIYTSQID
RALVGKQKVTSFLFEAEREWENEVPLKNFSISSNNPTVPILNLTGEPLSLESYTSCIDID
HMKPGVESIEGPPESSLSDITQETSEAADTETKGSFSSDKSIEAFGGVSPSSLQANYFDG
LERKSKVSIASPSESASSSVAVPQRMTDGNLVLMDAACCIGQEGFVFEEPLPELAQECCG
DTVVNREPLSLLQGDPALQMDYILEESALAESPNMGLTFSELNTGVLSEEVAKINIEDVS
DSTSFMSASTSSDRAVSPFTYGSALTLKQKKKAGHNALRFIRQYPFAQQAIFCLLSGRTL
VILGVDEGTVRKLVNALLFFVPNLGKYGETVQPWLSSPFQLIDLQRWKLIGLQRAASPAG
SSILHSLNRYSRYISILDCDSKTLRCPPYKGTLISRLADHRTQIKRGSTYFLHVQGMLTQ
LTARAFLYTFCHHIHLPMDINDQGSVTSRRTNFLLQLGYTVEESKIVQYLSELIKQHYMQ
GSSKGGNQSFCFNYTTSYLYKI
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgattggctctccagatgtggtggcttttaccaaagaagatgactttggggactcattc
tcagatccattctcacttccagaggagttttcagtgcctttgtttgctcatgctgccaat
gcaaatccctggacgaagacatcctatgcaaaattctcaaaagatttcatactcatctct
gaattttcagaacaggttggtcctcagcctttactcaccattcccaatgatcccaaagtg
tgtgggacatttgaccttaactacttctcacttcgcatcatgtctgtggactaccaggcg
tcttttgttgggcatcctcctggcagtaactacccaaggctcaattttgtggaggactca
aaagttgtcctgggtgattccaaggaaggggcgttcgcttacgtccatcatctgacactg
tacgacttggaggcccgtggatttgtgcgccccttttgcatggcctacatttccgcagac
gaaaggaagatcatgcatcagtttcaagagctgtcatccgagttttccaaggcttccgaa
tttctcaagtcaggcaacaggaaagctttcgcaaatgaactggaaaagaaactgaaagac
ctagagtacaccagatcagtgctgcacaaagaggctgagctgcagaaaatgaacaatggc
tgttattccacacaagctattgagaaggcaaatgaattggccaatatggagaagtccatc
tatgaacacaaagatctgctgaggcaaataacatcttatccttccagaaaaaagaaagat
gtccattttgtacaacgcgagacagagaaactggctgacacaagtgtattggatgataca
cctaatagtaatccttctgagattgcagataaaactgtggaaactgaaaacgatattaga
aagtcctcttatacgcctcagctcattaagggcaaatctgcgaagtgctttgataaacgc
ttgaaaacgatggaagagctctgtgacgccagcttttttcaccaaactctagagcaacta
aacataattgagaagtctttcagaggagatctgtgctttatttacactagccagattgac
agggctcttgtgggcaaacagaaagttaccagtttcctctttgaagctgaacgcgaatgg
gagaacgaagtacccttaaagaacttcagtatttcttccaacaatccaacagtccccatt
ctgaacttaactggcgagccgctgagtctggaatcatacacaagctgcatagatatagat
cacatgaagccaggtgtggagtctattgaagggcctcctgagtccagtttatctgacatt
acgcaggaaacctcagaggccgccgacaccgagaccaaagggagtttcagtagtgacaag
agcattgaagcttttggaggtgtcagtccttccagtctacaggcaaattactttgatggt
ctcgaaagaaagagcaaggtatccattgcatcaccatctgaaagtgcatccagctctgtt
gctgtcccacaaaggatgactgatgggaatctagtcctgatggatgcagcctgctgtatt
ggacaggagggtttcgtttttgaggaacctttacctgagcttgctcaggagtgctgtggg
gacacagtggtgaaccgagaacctctgtctcttcttcagggagaccctgccttacagatg
gactacattttggaagagtcagcccttgcagagagcccaaacatgggactgactttttct
gaactgaacactggcgttctttcggaggaggtggcgaaaattaatatcgaagacgtctcg
gatagtacaagctttatgagcgcctccacaagttctgaccgtgctgtgtctccgttcacc
tacggcagtgcgttgacgctaaagcagaagaagaaagctggtcacaacgctcttcgattc
atcaggcaatatccatttgctcagcaagccattttctgccttcttagtggccgaacgctt
gttattttaggggtggacgagggcacggtgaggaagctagtcaatgcattgttgtttttc
gttcccaatctcggaaagtacggtgaaaccgtccagccgtggctttcatcgccatttcag
ctcatcgacctgcagagatggaaacttattgggttgcagagagctgcctcgccagctgga
tccagcattctccactctttgaatcgatacagccgttacataagcattttggactgtgac
agcaagaccctccggtgtccaccatacaaaggaacactaataagccgtttggcagaccac
aggactcagatcaaacgtggcagtacctacttcctccatgttcagggtatgttgactcag
cttacagccagggcattcctttacacattctgccatcatattcaccttcccatggacatc
aacgaccagggctcggtaacatcacgtaggactaatttcttgttgcagctcggctacact
gtggaggagagtaaaatcgtccagtacctgagtgagctcatcaagcagcattacatgcag
gggtcctcaaaggggggcaaccagtctttttgttttaattacaccaccagctatttgtac
aaaatctga
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